nixpkgs/pkgs/applications/science/biology/ncbi-tools/default.nix

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{stdenv, fetchurl, cpio}:
# Note: may need the C-libs at ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/Mar_17_2008/NCBI_C_Toolkit/ncbi_c--Mar_17_2008.tar.gz (or split out?)
stdenv.mkDerivation rec {
name = "ncbi_cxx";
ncbi_version = "Mar_17_2008";
src = fetchurl {
url = "ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/${ncbi_version}/ncbi_cxx--${ncbi_version}.tar.gz";
sha256 = "0mxbmz6gndallz8l5jdslq6illa3hgf31xi2yb984mqm9in485as";
};
configureFlags = "--without-debug --with-bin-release --with-dll --without-static";
buildInputs = [cpio];
meta = {
description = ''NCBI Bioinformatics toolbox (incl. blast)'';
longDescription = ''The NCBI Bioinformatics toolsbox, including command-line utilties, libraries and include files. No X11 support (at this point).'';
homepage = http://www.ncbi.nlm.nih.gov/IEB/ToolBox/;
license = "GPL";
priority = "5"; # zlib.so gives a conflict with zlib
};
}