nixpkgs/pkgs/applications/science/biology/spades/default.nix

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{ stdenv, fetchurl, zlib, bzip2, cmake, python3 }:
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stdenv.mkDerivation rec {
pname = "SPAdes";
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version = "3.14.1";
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src = fetchurl {
url = "http://cab.spbu.ru/files/release${version}/${pname}-${version}.tar.gz";
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sha256 = "1ji3afn6yvx7ysg7p9j0d1g28zrnxg1b7x90mhs2bj3lgs7vfafn";
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};
nativeBuildInputs = [ cmake ];
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buildInputs = [ zlib bzip2 python3 ];
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doCheck = true;
sourceRoot = "${pname}-${version}/src";
meta = with stdenv.lib; {
description = "St. Petersburg genome assembler: assembly toolkit containing various assembly pipelines";
license = licenses.gpl2;
homepage = "http://cab.spbu.ru/software/spades/";
platforms = platforms.unix;
maintainers = [ maintainers.bzizou ];
};
}