nixpkgs/pkgs/development/python-modules/dendropy/default.nix

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{ lib
, pkgs
, buildPythonPackage
, fetchFromGitHub
, pytest
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}:
buildPythonPackage rec {
pname = "DendroPy";
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version = "4.4.0";
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# tests are incorrectly packaged in pypi version
src = fetchFromGitHub {
owner = "jeetsukumaran";
repo = pname;
rev = "v${version}";
sha256 = "097hfyv2kaf4x92i4rjx0paw2cncxap48qivv8zxng4z7nhid0x9";
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};
preCheck = ''
# Needed for unicode python tests
export LC_ALL="en_US.UTF-8"
cd tests # to find the 'support' module
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'';
checkInputs = [ pytest pkgs.glibcLocales ];
checkPhase = ''
pytest -k 'not test_dataio_nexml_reader_tree_list and not test_pscores_with'
'';
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meta = {
homepage = "https://dendropy.org/";
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description = "A Python library for phylogenetic computing";
maintainers = with lib.maintainers; [ unode ];
license = lib.licenses.bsd3;
};
}