python3Packages.monty: add missing pydanctic and tqdm dependencies
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@ -1,22 +1,20 @@
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{ lib
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{ lib
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, buildPythonPackage
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, buildPythonPackage
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, fetchFromGitHub
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, fetchFromGitHub
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, isPy27
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, pythonOlder
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, msgpack
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, nose
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, nose
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, numpy
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, numpy
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, six
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, pydantic
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, ruamel_yaml
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, msgpack
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, coverage
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, coveralls
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, pymongo
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, pymongo
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, lsof
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, ruamel_yaml
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, tqdm
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}:
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}:
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buildPythonPackage rec {
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buildPythonPackage rec {
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pname = "monty";
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pname = "monty";
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version = "2021.3.3";
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version = "2021.3.3";
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disabled = isPy27; # uses type annotations
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disabled = pythonOlder "3.5"; # uses type annotations
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# No tests in Pypi
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# No tests in Pypi
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src = fetchFromGitHub {
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src = fetchFromGitHub {
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@ -26,21 +24,30 @@ buildPythonPackage rec {
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sha256 = "1nbv0ys0fv70rgzskkk8gsfr9dsmm7ykim5wv36li840zsj83b1l";
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sha256 = "1nbv0ys0fv70rgzskkk8gsfr9dsmm7ykim5wv36li840zsj83b1l";
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};
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};
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checkInputs = [ lsof nose numpy msgpack coverage coveralls pymongo];
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propagatedBuildInputs = [
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propagatedBuildInputs = [ six ruamel_yaml ];
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ruamel_yaml
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tqdm
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msgpack
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];
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# test suite tries to decode bytes, but msgpack now returns a str
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checkInputs = [
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# https://github.com/materialsvirtuallab/monty/pull/121
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nose
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postPatch = ''
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numpy
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substituteInPlace tests/test_serialization.py \
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pydantic
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--replace ".decode('utf-8')" ""
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pymongo
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'';
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];
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preCheck = ''
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preCheck = ''
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substituteInPlace tests/test_os.py \
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substituteInPlace tests/test_os.py \
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--replace 'self.assertEqual("/usr/bin/find", which("/usr/bin/find"))' '#'
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--replace 'self.assertEqual("/usr/bin/find", which("/usr/bin/find"))' '#'
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'';
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'';
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checkPhase = ''
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runHook preCheck
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nosetests -v
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runHook postCheck
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'';
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meta = with lib; {
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meta = with lib; {
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description = "Serves as a complement to the Python standard library by providing a suite of tools to solve many common problems";
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description = "Serves as a complement to the Python standard library by providing a suite of tools to solve many common problems";
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longDescription = "
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longDescription = "
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