diff --git a/pkgs/applications/virtualization/singularity/default.nix b/pkgs/applications/virtualization/singularity/default.nix index 12057c221e8..8ec9ec6c8b4 100644 --- a/pkgs/applications/virtualization/singularity/default.nix +++ b/pkgs/applications/virtualization/singularity/default.nix @@ -15,13 +15,13 @@ with lib; buildGoPackage rec { name = "singularity-${version}"; - version = "3.0.1"; + version = "3.2.1"; src = fetchFromGitHub { owner = "sylabs"; repo = "singularity"; rev = "v${version}"; - sha256 = "1wpsd0il2ipa2n5cnbj8dzs095jycdryq2rx62kikbq7ahzz4fsi"; + sha256 = "14lhxwy21s7q081x7kbnvkjsbxgsg2f181qlzmlxcn6n7gfav3kj"; }; goPackagePath = "github.com/sylabs/singularity"; @@ -32,22 +32,16 @@ buildGoPackage rec { propagatedBuildInputs = [ coreutils squashfsTools ]; postConfigure = '' - find . -name vendor -type d -print0 | xargs -0 rm -rf - cd go/src/github.com/sylabs/singularity patchShebangs . - sed -i 's|defaultEnv := "/bin:/usr/bin:/sbin:/usr/sbin:/usr/local/bin:/usr/local/sbin"|defaultEnv := "${stdenv.lib.makeBinPath propagatedBuildInputs}"|' src/cmd/singularity/cli/singularity.go + sed -i 's|defaultPath := "[^"]*"|defaultPath := "${stdenv.lib.makeBinPath propagatedBuildInputs}"|' cmd/internal/cli/actions.go ./mconfig -V ${version} -p $bin --localstatedir=/var - touch builddir/.dep-done - touch builddir/vendors-done # Don't install SUID binaries sed -i 's/-m 4755/-m 755/g' builddir/Makefile - # Point to base gopath - sed -i "s|^cni_vendor_GOPATH :=.*\$|cni_vendor_GOPATH := $NIX_BUILD_TOP/go/src/github.com/containernetworking/plugins/plugins|" builddir/Makefile ''; buildPhase = '' @@ -57,6 +51,7 @@ buildGoPackage rec { installPhase = '' make -C builddir install LOCALSTATEDIR=$bin/var chmod 755 $bin/libexec/singularity/bin/starter-suid + wrapProgram $bin/bin/singularity --prefix PATH : ${stdenv.lib.makeBinPath propagatedBuildInputs} ''; postFixup = '' diff --git a/pkgs/applications/virtualization/singularity/deps.nix b/pkgs/applications/virtualization/singularity/deps.nix index 526202e75ae..fe51488c706 100644 --- a/pkgs/applications/virtualization/singularity/deps.nix +++ b/pkgs/applications/virtualization/singularity/deps.nix @@ -1,669 +1 @@ -# file generated from Gopkg.lock using dep2nix (https://github.com/nixcloud/dep2nix) -[ - { - goPackagePath = "github.com/Microsoft/go-winio"; - fetch = { - type = "git"; - url = "https://github.com/Microsoft/go-winio"; - rev = "7da180ee92d8bd8bb8c37fc560e673e6557c392f"; - sha256 = "19gjjhmzswhm11wzj38r5alxypmflmy0z42flhc3czhmmwv7b1av"; - }; - } - { - goPackagePath = "github.com/alexflint/go-filemutex"; - fetch = { - type = "git"; - url = "https://github.com/alexflint/go-filemutex"; - rev = "d358565f3c3f5334209f1e80693e4f621650c489"; - sha256 = "19fzbm0x8821awsmqj9ig49dxxkd72p1yfqbijmdwwszvw2r0ggz"; - }; - } - { - goPackagePath = "github.com/beorn7/perks"; - fetch = { - type = "git"; - url = "https://github.com/beorn7/perks"; - rev = "3a771d992973f24aa725d07868b467d1ddfceafb"; - sha256 = "1l2lns4f5jabp61201sh88zf3b0q793w4zdgp9nll7mmfcxxjif3"; - }; - } - { - goPackagePath = "github.com/blang/semver"; - fetch = { - type = "git"; - url = "https://github.com/blang/semver"; - rev = "2ee87856327ba09384cabd113bc6b5d174e9ec0f"; - sha256 = "13ws259bwcibkclbr82ilhk6zadm63kxklxhk12wayklj8ghhsmy"; - }; - } - { - goPackagePath = "github.com/containerd/cgroups"; - fetch = { - type = "git"; - url = "https://github.com/containerd/cgroups"; - rev = "5017d4e9a9cf2d4381db99eacd9baf84b95bfb14"; - sha256 = "02pvcmj91j3maa9j1v91m2z9kpa6p822h06r007b3pl7h0paiqnj"; - }; - } - { - goPackagePath = "github.com/containerd/continuity"; - fetch = { - type = "git"; - url = "https://github.com/containerd/continuity"; - rev = "246e49050efdf45e8f17fbbcf1547ee376f9939e"; - sha256 = "1zc1f0yixf32lprp5r77z2j9xq7fk0hijq8xzl08j4zrk0fcy8aq"; - }; - } - { - goPackagePath = "github.com/containernetworking/cni"; - fetch = { - type = "git"; - url = "https://github.com/containernetworking/cni"; - rev = "a7885cb6f8ab03fba07852ded351e4f5e7a112bf"; - sha256 = "00ajs2r5r2z3l0vqwxrcwhjfc9px12qbcv5vnvs2mdipvvls1y2y"; - }; - } - { - goPackagePath = "github.com/containernetworking/plugins"; - fetch = { - type = "git"; - url = "https://github.com/containernetworking/plugins"; - rev = "2b8b1ac0af4568e928d96ccc5f47b075416eeabd"; - sha256 = "1yl9m8pwjmqxj3hf0w9s6rykszhcww54z07yjgxzabmqf2dhchxv"; - }; - } - { - goPackagePath = "github.com/containers/image"; - fetch = { - type = "git"; - url = "https://github.com/containers/image"; - rev = "2e4f799f5eba49a2498d2793cfb2a4bc823ca3f6"; - sha256 = "0b9symgbkd2vgvp7mfpz1l03i2zivwbc5ycccwv78b1ikk9m6b75"; - }; - } - { - goPackagePath = "github.com/containers/storage"; 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