sasview: fix build (#40433)

The package breaks currently breaks with the following message:

```
fixed-output derivation produced path '/nix/store/5dh1mdj027ad8sprk12fqa5h5bpdxs5n-sasview' with sha256 hash '12k1w4yq1mzjxcp2cqb562c7cbwzhi54rsbmgi0fax0i1660q167' instead of the expected hash '05la54wwzzlkhmj8vkr0bvzagyib6z6mgwqbddzjs5y1wd48vpcx'
```

To fix the build the following changes were applied:

* Switched to latest master for now as the older releases have a broken
  `py.test` configuration and altering hashes.

* Added `checkPhase` which invokes `py.test` directly and drops
  duplicated files from `dist/tmpbuild`.

* Rebased the patches `pyparsing-fix.patch` and `local_config.patch` for
  the latest master revision.

Additionally refer to the discussion in #40381 for further reference.
This commit is contained in:
Maximilian Bosch 2018-05-13 17:25:18 +02:00 committed by xeji
parent 8712ea5ccf
commit be53a0f2ef
3 changed files with 56 additions and 24 deletions

View file

@ -1,7 +1,8 @@
{lib, fetchgit, gcc, python}:
{ lib, fetchFromGitHub, gcc, python }:
let
xhtml2pdf = import ./xhtml2pdf.nix { inherit lib;
xhtml2pdf = import ./xhtml2pdf.nix {
inherit lib;
fetchPypi = python.pkgs.fetchPypi;
buildPythonPackage = python.pkgs.buildPythonPackage;
html5lib = python.pkgs.html5lib;
@ -10,17 +11,29 @@ let
pillow = python.pkgs.pillow;
pypdf2 = python.pkgs.pypdf2;
reportlab = python.pkgs.reportlab;
};
};
in
python.pkgs.buildPythonApplication rec {
pname = "sasview";
version = "4.1.2";
version = "unstable-2018-05-05";
buildInputs = with python.pkgs; [
checkInputs = with python.pkgs; [
pytest
unittest-xml-reporting];
unittest-xml-reporting
];
checkPhase = ''
# fix the following error:
# imported module 'sas.sascalc.data_util.uncertainty' has this __file__ attribute:
# /build/source/build/lib.linux-x86_64-2.7/sas/sascalc/data_util/uncertainty.py
# which is not the same as the test file we want to collect:
# /build/source/dist/tmpbuild/sasview/sas/sascalc/data_util/uncertainty.py
rm -r dist/tmpbuild
HOME=$(mktemp -d) py.test
'';
propagatedBuildInputs = with python.pkgs; [
bumps
@ -41,20 +54,22 @@ python.pkgs.buildPythonApplication rec {
six
sphinx
wxPython
xhtml2pdf];
xhtml2pdf
];
src = fetchgit {
url = "https://github.com/SasView/sasview.git";
rev = "v${version}";
sha256 ="05la54wwzzlkhmj8vkr0bvzagyib6z6mgwqbddzjs5y1wd48vpcx";
src = fetchFromGitHub {
owner = "SasView";
repo = "sasview";
rev = "de431924d0ddf73cfb952df88bd6661181947019";
sha256 = "01bk0i0g65yzyq16n1a61rgjna8rrc2i51x2ndf1z7khb1fl16vg";
};
patches = [./pyparsing-fix.patch ./local_config.patch];
patches = [ ./pyparsing-fix.patch ./local_config.patch ];
meta = {
meta = with lib; {
homepage = https://www.sasview.org;
description = "Fitting and data analysis for small angle scattering data";
maintainers = with lib.maintainers; [ rprospero ];
license = lib.licenses.bsd3;
maintainers = with maintainers; [ rprospero ];
license = licenses.bsd3;
};
}

View file

@ -1,10 +1,22 @@
diff --git a/src/sas/_config.py b/src/sas/_config.py
index ece08fd4c..926768593 100644
--- a/src/sas/_config.py
+++ b/src/sas/_config.py
@@ -70,2 +70,2 @@
@@ -67,8 +67,8 @@ def load_local_config(app_dir):
logger.info("GuiManager loaded %s", path)
return module
except Exception as exc:
- logger.critical("Error loading %s: %s", path, exc)
- sys.exit()
+ import sas.sasview.local_config
+ return sas.sasview.local_config
--
2.15.0
def make_custom_config_path(user_dir):
"""
@@ -116,4 +116,4 @@ def load_custom_config(path):
from sas.sasview import custom_config
logger.info("GuiManager custom_config defaults to sas.sasview.custom_config")
- return custom_config
\ No newline at end of file
+ return custom_config

View file

@ -1,8 +1,13 @@
diff --git a/setup.py b/setup.py
index 866ab7e36..78727b276 100755
--- a/setup.py
+++ b/setup.py
@@ -5,1 +5,1 @@
- 'bumps>=0.7.5.9', 'periodictable>=1.5.0', 'pyparsing<2.0.0',
@@ -401,7 +401,7 @@ package_data['sas.sasview'] = ['images/*',
packages.append("sas.sasview")
required = [
- 'bumps>=0.7.5.9', 'periodictable>=1.5.0', 'pyparsing>=2.0.0',
+ 'bumps>=0.7.5.9', 'periodictable>=1.5.0',
--
2.15.0
# 'lxml>=2.2.2',
'lxml', 'h5py',