Merge pull request #16470 from bcdarwin/nipy

pythonPackages.nipy: init at 0.4.0
This commit is contained in:
Frederik Rietdijk 2016-06-24 16:55:10 +02:00 committed by GitHub
commit c88b4060e0

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@ -13602,6 +13602,48 @@ in modules // {
};
};
nipy = buildPythonPackage rec {
version = "0.4.0";
name = "nipy-${version}";
disabled = pythonOlder "2.6";
checkPhase = '' # wants to be run in a different directory
mkdir nosetests
cd nosetests
${python.interpreter} -c "import nipy; nipy.test()"
rm -rf .
'';
# failing test:
# nipy.algorithms.statistics.models.tests.test_olsR.test_results(11.593139639404727, 11.593140144880794, 6) # disagrees by 1 at 6th decimal place
# erroring tests:
# nipy.modalities.fmri.fmristat.tests.test_FIAC.test_altprotocol
# nipy.modalities.fmri.fmristat.tests.test_FIAC.test_agreement
# nipy.tests.test_scripts.test_nipy_4d_realign # because `nipy_4d_realign` script isn't found at test time; works from nix-shell, so could be patched
# nipy.tests.test_scripts.test_nipy_3_4d # ditto re.: `nipy_3_4d` script
doCheck = false;
src = pkgs.fetchurl {
url = "mirror://pypi/n/nipy/${name}.tar.gz";
sha256 = "1hnbn2i4fjxflaaz082s2c57hfp59jfra1zayz1iras5p2dy21nr";
};
buildInputs = stdenv.lib.optional doCheck [ self.nose ];
propagatedBuildInputs = with self; [
nibabel
numpy
scipy
sympy
];
meta = {
homepage = http://nipy.org/nipy/;
description = "Software for structural and functional neuroimaging analysis";
license = licenses.bsd3;
};
};
nipype = buildPythonPackage rec {
version = "0.10.0";
name = "nipype-${version}";