From f532f9f5f4d79a0ce3d2903ab9cd0dc7cfaa6aec Mon Sep 17 00:00:00 2001 From: Ben Darwin Date: Mon, 25 Sep 2017 12:17:49 -0400 Subject: [PATCH] minc-widgets: init at "1.0.0" (package seems to lack a consistent version) --- .../science/biology/minc-widgets/default.nix | 33 +++++++++++++++++++ pkgs/top-level/all-packages.nix | 4 +++ 2 files changed, 37 insertions(+) create mode 100644 pkgs/applications/science/biology/minc-widgets/default.nix diff --git a/pkgs/applications/science/biology/minc-widgets/default.nix b/pkgs/applications/science/biology/minc-widgets/default.nix new file mode 100644 index 00000000000..0474ad1bff0 --- /dev/null +++ b/pkgs/applications/science/biology/minc-widgets/default.nix @@ -0,0 +1,33 @@ +{ stdenv, fetchFromGitHub, cmake, makeWrapper, + perl, GetoptTabular, MNI-Perllib, + libminc, octave, coreutils, minc_tools }: + +stdenv.mkDerivation rec { + pname = "minc-widgets"; + name = "${pname}-1.0.0"; + + + src = fetchFromGitHub { + owner = "BIC-MNI"; + repo = pname; + rev = "f08b643894c81a1a2e0fbfe595a17a42ba8906db"; + sha256 = "1b9g6lf37wpp211ikaji4rf74rl9xcmrlyqcw1zq3z12ji9y33bm"; + }; + + nativeBuildInputs = [ cmake makeWrapper ]; + buildInputs = [ libminc ]; + propagatedBuildInputs = [ perl GetoptTabular MNI-Perllib octave coreutils minc_tools ]; + + postFixup = '' + for p in $out/bin/*; do + wrapProgram $p --prefix PERL5LIB : $PERL5LIB --set PATH "${stdenv.lib.makeBinPath [ coreutils minc_tools ]}"; + done + ''; + + meta = with stdenv.lib; { + homepage = "https://github.com/BIC-MNI/${pname}"; + description = "Collection of Perl and shell scripts for processing MINC files"; + maintainers = with maintainers; [ bcdarwin ]; + platforms = platforms.unix; + }; +} diff --git a/pkgs/top-level/all-packages.nix b/pkgs/top-level/all-packages.nix index ba3d6192a21..056b35f1426 100644 --- a/pkgs/top-level/all-packages.nix +++ b/pkgs/top-level/all-packages.nix @@ -19765,6 +19765,10 @@ with pkgs; inherit (perlPackages) TextFormat; }; + minc_widgets = callPackage ../applications/science/biology/minc-widgets { + inherit (perlPackages) GetoptTabular MNI-Perllib; + }; + mni_autoreg = callPackage ../applications/science/biology/mni_autoreg { inherit (perlPackages) GetoptTabular MNI-Perllib; };