From e2b87969834f132457e11f09025845d68b6cf185 Mon Sep 17 00:00:00 2001 From: Alex Vorobiev Date: Mon, 21 May 2018 22:56:03 -0500 Subject: [PATCH] pythonPackages.clustershell: init at 1.8 --- .../python-modules/clustershell/default.nix | 89 +++++++++++++++++++ pkgs/top-level/python-packages.nix | 2 + 2 files changed, 91 insertions(+) create mode 100644 pkgs/development/python-modules/clustershell/default.nix diff --git a/pkgs/development/python-modules/clustershell/default.nix b/pkgs/development/python-modules/clustershell/default.nix new file mode 100644 index 00000000000..617b0ea101f --- /dev/null +++ b/pkgs/development/python-modules/clustershell/default.nix @@ -0,0 +1,89 @@ +{ stdenv, buildPythonPackage, fetchPypi, pyyaml, openssh +, nose, bc, hostname, coreutils, bash, gnused +}: + +buildPythonPackage rec { + pname = "ClusterShell"; + version = "1.8"; + + src = fetchPypi { + inherit pname version; + sha256 = "1bm0pq8w2rql9q9i2bhs865rqvb6zck3h3gkb1d0mh59arrr7p4m"; + }; + + propagatedBuildInputs = [ pyyaml ]; + + postPatch = '' + substituteInPlace lib/ClusterShell/Worker/Ssh.py \ + --replace '"ssh"' '"${openssh}/bin/ssh"' \ + --replace '"scp"' '"${openssh}/bin/scp"' + + substituteInPlace lib/ClusterShell/Worker/fastsubprocess.py \ + --replace '"/bin/sh"' '"${bash}/bin/sh"' + ''; + + checkInputs = [ nose bc hostname coreutils gnused ]; + + # Many tests want to open network connections + # https://github.com/cea-hpc/clustershell#test-suite + # + # Several tests fail on Darwin + checkPhase = '' + for f in tests/*; do + substituteInPlace $f \ + --replace '/bin/hostname' '${hostname}/bin/hostname' \ + --replace '/bin/sleep' '${coreutils}/bin/sleep' \ + --replace '"sleep' '"${coreutils}/bin/sleep' \ + --replace '/bin/echo' '${coreutils}/bin/echo' \ + --replace '/bin/uname' '${coreutils}/bin/uname' \ + --replace '/bin/false' '${coreutils}/bin/false' \ + --replace '/bin/true' '${coreutils}/bin/true' \ + --replace '/usr/bin/printf' '${coreutils}/bin/printf' \ + --replace '"sed' '"${gnused}/bin/sed' \ + --replace ' sed ' ' ${gnused}/bin/sed ' + done + + rm tests/CLIClushTest.py + rm tests/TreeWorkerTest.py + rm tests/TaskDistantMixin.py + rm tests/TaskDistantTest.py + rm tests/TaskDistantPdshMixin.py + rm tests/TaskDistantPdshTest.py + rm tests/TaskRLimitsTest.py + + nosetests -v \ + -e test_channel_ctl_shell_remote1 \ + -e test_channel_ctl_shell_remote2 \ + -e test_fromall_grouplist \ + -e test_rank_placeholder \ + -e test_engine_on_the_fly_launch \ + -e test_ev_pickup_fanout \ + -e test_ev_pickup_fanout_legacy \ + -e test_timeout \ + -e test_008_broken_pipe_on_write \ + -e testLocalBufferRCGathering \ + -e testLocalBuffers \ + -e testLocalErrorBuffers \ + -e testLocalFanout \ + -e testLocalRetcodes \ + -e testLocalRCBufferGathering \ + -e testLocalSingleLineBuffers \ + -e testLocalWorkerFanout \ + -e testSimpleMultipleCommands \ + -e testClushConfigSetRlimit \ + -e testTimerInvalidateInHandler \ + -e testTimerSetNextFireInHandler \ + -e test_channel_ctl_shell_mlocal1 \ + -e test_channel_ctl_shell_mlocal2 \ + -e test_channel_ctl_shell_mlocal3 \ + -e test_node_placeholder \ + tests/*.py + ''; + + meta = with stdenv.lib; { + description = "Scalable Python framework for cluster administration"; + homepage = https://cea-hpc.github.io/clustershell; + license = licenses.lgpl21; + maintainers = [ maintainers.alexvorobiev ]; + }; +} diff --git a/pkgs/top-level/python-packages.nix b/pkgs/top-level/python-packages.nix index 204a49e63b4..d36aab408ed 100644 --- a/pkgs/top-level/python-packages.nix +++ b/pkgs/top-level/python-packages.nix @@ -225,6 +225,8 @@ in { cdecimal = callPackage ../development/python-modules/cdecimal { }; + clustershell = callPackage ../development/python-modules/clustershell { }; + dendropy = callPackage ../development/python-modules/dendropy { }; dbf = callPackage ../development/python-modules/dbf { };