Commit graph

7 commits

Author SHA1 Message Date
Matthieu Coudron ef156fb8ed rWrapper: use symlinkJoin instead of runCommand
While trying to build a haskell-project I got:

Configuring library for inline-r-0.10.4..
cabal: The pkg-config package 'libR' version ==3.0 || >3.0 is required but it
could not be found.

the rWrapper was only bringing the R binary without its companion
library: this fixes it.
2021-01-18 10:35:35 +01:00
Joachim Fasting d2b467a2de
rWrapper: use runCommand, local build only
This seems more appropriate for a wrapper generator.
2018-12-05 20:59:35 +01:00
Timo Kaufmann 63b39af496
pythonPackages.rpy2: various fixes (#51084)
- make sure libreadline is found at runtime
- make sure python libraries are found at runtime
- add libraries necessary to pass the testsuite and standard libraries
2018-11-27 18:24:37 +01:00
Chris Hodapp 29969a5ec7 rstudio: Fix recompilation issue with custom package set
This attempts to fix the issue described at
https://github.com/NixOS/nixpkgs/pull/22219#issuecomment-291801133.
Any change to the custom packages passed to RStudio causes this to
completely rebuild RStudio, which is completely unnecessary and also a
bit of a hindrance as it's a fairly slow build.

This rolls back most of that old PR, and instead implements something
more like rWrapper.  Existing configurations with the old useRPackages
will break.
2017-05-01 09:46:40 -04:00
Chris Hodapp 7638578342 RStudio: Optionally allow packages from custom R environment
https://nixos.org/nixpkgs/manual/#r-packages contains a method for
setting up an R environment with a specific set of libraries, and it
creates an R wrapper which points R to those libraries.

The package RStudio relies on the standard R package, which then
cannot access any of the libraries specified in a custom R
environment.  While one may easily use pkgs.rstudio.override to change
rstudio's R dependency to the custom R environment, this accomplishes
nothing because while RStudio runs the correct R wrapper it clears out
the environment variable R_LIBS_SITE - and so it is still unable to
use any of those packages.

In order to work around this problem, these changes allow the user to
optionally modify rstudio's wrapper to set environment variable
R_PROFILE_USER to an R script which sets R's .libPaths(..) to point to
the same libraries; that script is generated from R_LIBS_SITE in the R
wrapper.

By default, this change has no effect.  If R is overridden to
something else, and if useRPackages is changed from its default of
false, then the change described above is made; for instance:

{
  packageOverrides = pkgs: let self = pkgs.pkgs; in
  rec {
    rEnv = pkgs.rWrapper.override {
      packages = with self.rPackages; [
        dplyr ggplot2 e1071 rpart reshape
      ];
    };
    rstudioEnv = pkgs.rstudio.override { R = rEnv; useRPackages = true; };
  };
}
2017-01-27 18:54:50 -05:00
Tuomas Tynkkynen 2258b21e4b treewide: Add lots of platforms to packages with no meta
Build-tested on x86_64 Linux and on Darwin.
2016-08-02 21:17:44 +03:00
Peter Simons 66bcd77f0e R: simplify the generic builder 2014-05-04 23:54:11 +02:00
Renamed from pkgs/development/r-modules/wrapper/default.nix (Browse further)