Commit graph

4824 commits

Author SHA1 Message Date
github-actions[bot] 655989d7b3
Merge staging-next into staging 2021-04-28 00:15:29 +00:00
Gabriel Ebner a062505e10
Merge pull request #120177 from r-ryantm/auto-update/elan
elan: 0.11.0 -> 1.0.0
2021-04-27 22:52:12 +02:00
R. RyanTM 32cb3382e5 elan: 0.11.0 -> 1.0.0 2021-04-27 22:32:13 +02:00
Gabriel Ebner abbc2384d7
Merge pull request #120822 from r-ryantm/auto-update/lean
lean: 3.28.0 -> 3.29.0
2021-04-27 22:28:19 +02:00
erikbackman 95b40e4143 (numworks-epsilon): init at 15.3.2 2021-04-27 19:07:25 +02:00
R. RyanTM 4ccb9422c7 lean: 3.28.0 -> 3.29.0 2021-04-27 05:34:13 +00:00
github-actions[bot] e30742adc3
Merge staging-next into staging 2021-04-26 12:06:35 +00:00
Vincent Laporte 35dfa0e927 alt-ergo: 2.3.3 → 2.4.0 2021-04-26 08:32:18 +02:00
github-actions[bot] 28c3da370d
Merge staging-next into staging 2021-04-26 06:05:56 +00:00
R. RyanTM 224fc21cc3 tetgen: 1.5.1 -> 1.6.0 2021-04-26 01:32:28 -04:00
github-actions[bot] 8634c6f7d1
Merge staging-next into staging 2021-04-26 00:17:03 +00:00
Mauricio Collares e1ad2f5aa4 sage: remove cypari2 override
This reverts commit c12ef05bda.
2021-04-25 18:21:58 -03:00
Michael Raskin 14f65f0dc5
Merge pull request #116365 from omasanori/sage-9.3
sage: 9.2 -> 9.3
2021-04-25 21:17:32 +00:00
github-actions[bot] 9a945aac72
Merge staging-next into staging 2021-04-25 18:14:18 +00:00
Eduardo Sánchez Muñoz 6b9e396a07 qalculate-gtk: 3.17.0 -> 3.18.0 2021-04-25 16:17:26 +02:00
github-actions[bot] 944e32775d
Merge staging-next into staging 2021-04-24 00:16:20 +00:00
Alyssa Ross 4f4d95bbc2
Merge remote-tracking branch 'nixpkgs/master' into staging-next
Conflicts:
	pkgs/development/python-modules/pyvex/default.nix
	pkgs/top-level/python-packages.nix
2021-04-23 13:49:12 +00:00
Michael Raskin 2a04a9ce44
Merge pull request #120168 from r-ryantm/auto-update/clingo
clingo: 5.4.1 -> 5.5.0
2021-04-23 08:51:33 +00:00
github-actions[bot] 0d97d9f23b
Merge staging-next into staging 2021-04-23 00:15:42 +00:00
github-actions[bot] 481a9bc47c
Merge master into staging-next 2021-04-23 00:15:39 +00:00
R. RyanTM 82bc3d6c28 clingo: 5.4.1 -> 5.5.0 2021-04-22 07:44:27 +00:00
R. RyanTM e230004975 calc: 2.12.9.1 -> 2.13.0.1 2021-04-22 06:59:52 +00:00
Masanori Ogino 090b71f627 sage: 9.2 -> 9.3.rc4
Co-authored-by: Mauricio Collares <mauricio@collares.org>
2021-04-22 14:06:56 +09:00
Mauricio Collares 00d2e24395 eclib: 20210223 -> 20190909
This reverts commits 003705ef08
and ef615b5a61.
2021-04-22 14:06:56 +09:00
Garaba Flórián a0f410646c sage: use threejs fork 2021-04-22 14:06:56 +09:00
Mauricio Collares 090165d7c1 singular: disable vspace on aarch64 2021-04-22 14:06:56 +09:00
Mauricio Collares cd7cf5942b singular: use older autoconf macro to unbreak aarch64 2021-04-22 09:01:30 +09:00
Mauricio Collares aebef1703f singular: import aarch64 support patch 2021-04-22 09:01:07 +09:00
Timo Kaufmann ceaf48fdb2 singular: 4.1.1p2 -> 4.2.0p2
Adds proper tests. Also removes the "enableFactory" option because
singular actually enables factory by default and explicitly disabling it
breaks the build. So the option was never really available.
2021-04-22 09:01:07 +09:00
Mauricio Collares cd215e793a pynac: 0.7.26 -> 0.7.27 2021-04-22 09:01:07 +09:00
Mauricio Collares 79046fb4f8 gap: 4.10.2 -> 4.11.0 2021-04-22 09:01:07 +09:00
github-actions[bot] a260b67879
Merge staging-next into staging 2021-04-21 12:06:26 +00:00
github-actions[bot] 9b3e698b14
Merge master into staging-next 2021-04-21 12:06:23 +00:00
Sandro 59f840f3d5
Merge pull request #119055 from eduardosm/kicad 2021-04-21 06:28:21 +02:00
Mario Rodas 8b2b6e4e11
Merge pull request #119682 from marsam/update-beluga
beluga: 2020-03-11 -> 1.0
2021-04-20 22:22:02 -05:00
github-actions[bot] 6929a896cf
Merge staging-next into staging 2021-04-20 12:06:48 +00:00
github-actions[bot] 960439e003
Merge master into staging-next 2021-04-20 12:06:46 +00:00
Maximilian Bosch 8389dcb67d
Merge pull request #119911 from jbedo/octopus
octopus: 0.7.1 -> 0.7.3
2021-04-20 10:58:42 +02:00
github-actions[bot] cf0edc0dea
Merge staging-next into staging 2021-04-20 06:06:28 +00:00
github-actions[bot] e605a07cc0
Merge master into staging-next 2021-04-20 06:06:25 +00:00
R. RyanTM 44a83a3cb6 gmsh: 4.8.0 -> 4.8.1 2021-04-19 22:37:39 -04:00
Justin Bedo def7c82f88
octopus: 0.7.1 -> 0.7.3 2021-04-20 10:13:25 +10:00
Jörg Thalheim b2a1e04eed
Merge remote-tracking branch 'upstream/staging-next' into HEAD 2021-04-17 16:37:04 +02:00
github-actions[bot] f620e30ca4
Merge master into staging-next 2021-04-17 00:15:03 +00:00
Vincent Laporte ab16ad8764 coq_8_13: 8.13.1 → 8.13.2 2021-04-16 22:32:31 +02:00
Alyssa Ross e459db3f81 glsurf: fix license
The README says GPL 2 or any later version, not LGPL.
2021-04-16 14:06:10 +00:00
Alyssa Ross 70e33e3ae3 glsurf: use current giflib
This requires bumping the version of camlimages used by glsurf to a
version that supports current giflib.  The most recent versions of
camlimages (even of 4.x) don't support ocaml 4.01 any more, so I've
upgraded to 4.1.2 here, the last version that supports ocaml 4.01 (and
which happily supports current giflib).
2021-04-16 14:06:10 +00:00
Alyssa Ross 6e3b5fd046 libungif: remove in favour of giflib
libungif was merged into giflib in 2006, and hasn't been updated
since.  All non-broken packages still using it build fine with giflib.

See <http://giflib.sourceforge.net/history.html>.
2021-04-16 14:06:10 +00:00
Martin Weinelt 7cf67850c0
Merge branch 'master' into staging-next 2021-04-15 01:01:26 +02:00
Sandro 28fb287d4b
Merge pull request #118610 from GregorySchwartz/init/macs2 2021-04-14 21:15:38 +02:00
Gregory W. Schwartz b7763a8287 macs2: init at 2.2.7.1
Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Update pkgs/applications/science/biology/macs2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Renamed package, updated version, set pypi, and added import test.

Update pkgs/applications/science/biology/MACS2/default.nix

Co-authored-by: Sandro <sandro.jaeckel@gmail.com>

Add comment about error for checking.

Two spaces indent.
2021-04-14 10:17:53 -04:00
Vladimír Čunát d2eb7a7887
Merge branch 'staging' into staging-next
A few conflicts but relatively clear ones (I think).
2021-04-14 10:08:25 +02:00
Dmitry Kalinkin a469a7be55
sherpa: compile with --enable-pythia flag 2021-04-13 09:34:42 -04:00
Luke Granger-Brown 08b22e605b Merge remote-tracking branch 'upstream/staging-next' into down-integrate-staging 2021-04-12 18:49:01 +00:00
hjones2199 79c3609603
celestia: 1.6.1 -> 1.6.2.2 (#117999)
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2021-04-12 20:17:17 +02:00
Fabian Affolter e4149e6e0b
rink: specify license 2021-04-11 23:18:32 +02:00
R. RyanTM 12518ff683 rink: 0.5.1 -> 0.6.0 2021-04-11 14:49:45 +00:00
Eduardo Sánchez Muñoz b5c90bb4da kicad: fix license
https://kicad.org/about/licenses/
2021-04-10 20:39:02 +02:00
Eduardo Sánchez Muñoz 427edc8b5a kicad: include desktop, icon and mime files
Fixes https://github.com/NixOS/nixpkgs/issues/106295.
2021-04-10 18:55:04 +02:00
Jan Tojnar 625ce6c7f6 Merge branch 'staging-next' into staging
In python-packages.nix, resolve conflict between 50d604314e and 187d0371ab.
2021-04-08 17:14:31 +02:00
Sandro 32b567d9e6
Merge pull request #118775 from lopsided98/qgroundcontrol-update
qgroundcontrol: 4.1.1 -> 4.1.2
2021-04-08 09:57:15 +02:00
Ben Wolsieffer 1e52d002bb qgroundcontrol: 4.1.1 -> 4.1.2 2021-04-08 00:04:07 -04:00
github-actions[bot] 1bd1969867
Merge staging-next into staging 2021-04-06 18:15:33 +00:00
Jan Tojnar 70babe5bcf Merge branch 'staging-next' into staging 2021-04-06 16:25:41 +02:00
voidless b6c315b4fb geogebra6: 6_0_620_0 -> 6_0_631_0 2021-04-06 10:52:30 +02:00
Dmitry Kalinkin 1d93243467
root: 6.22.06 -> 6.22.08 2021-04-06 02:41:06 -04:00
Gregory Schwartz 9bf867612d
meme-suite: init at 5.1.1 (#118603)
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2021-04-05 22:43:27 +02:00
Sandro Jäckel 3453b89f4b
lzma: deprecate alias 2021-04-04 19:49:52 +02:00
Frederik Rietdijk 1e7ed8b2f3
Merge branch 'staging' into python-unstable 2021-04-04 12:59:12 +02:00
Sandro Jäckel 33a395f195
yacc: deprecate alias
and add a new line after the alphabetically sorting to please my inner monk
2021-04-04 03:18:58 +02:00
Frederik Rietdijk c12ef05bda sage: keep cypari2 at 2.1.1 2021-04-03 17:49:44 +02:00
Frederik Rietdijk d20a05e963 libpoly: use python3 2021-04-03 17:06:22 +02:00
Frederik Rietdijk 7865ac1046 lean2: stay with python2
broken, so who knows...
2021-04-03 17:06:21 +02:00
Frederik Rietdijk 7368564f99 gurobi: stay with python2 2021-04-03 17:06:08 +02:00
Frederik Rietdijk ee258981bf ginac: use python3 2021-04-03 17:06:07 +02:00
Jack Gerrits dfab218b9b vowpal-wabbit: 8.9.2 -> 8.10.0 2021-04-01 13:46:09 -04:00
Mario Rodas d2275796d1 beluga: 2020-03-11 -> 1.0 2021-04-01 04:20:00 +00:00
Sandro 498cb76bdf
Merge pull request #117799 from LeSuisse/aliza-1.98.57
aliza: 1.98.43 -> 1.98.57
2021-03-30 17:18:15 +02:00
Sandro 9e24497453
Merge pull request #117970 from mpoquet/simgrid-3.26-to-3.27
simgrid: 3.26 -> 3.27
2021-03-30 14:28:37 +02:00
Ryan Mulligan f3262c2a3e
Merge pull request #117648 from r-ryantm/auto-update/picard-tools
picard-tools: 2.25.0 -> 2.25.1
2021-03-29 16:10:25 -07:00
Millian Poquet 99a5de6ebc simgrid: 3.26 -> 3.27 2021-03-29 21:20:27 +02:00
Justin Bedo 76bd953162 bedops: init 2.4.39 2021-03-28 22:27:51 -04:00
Maximilian Bosch b8779b59d5
Merge pull request #117760 from r-ryantm/auto-update/calc
calc: 2.12.9.0 -> 2.12.9.1
2021-03-28 23:35:49 +02:00
Maximilian Bosch 4fc2ef2c5e
stellarium: 0.20.4 -> 0.21.0
ChangeLog: https://github.com/Stellarium/stellarium/releases/tag/v0.21.0
2021-03-28 22:46:57 +02:00
Ryan Mulligan 9a35bc87e8
Merge pull request #117607 from r-ryantm/auto-update/marvin
marvin: 21.2.0 -> 21.3.0
2021-03-27 20:35:56 -07:00
Thomas Gerbet f801e2e92c aliza: 1.98.43 -> 1.98.57 2021-03-27 23:49:33 +01:00
R. RyanTM 190a6f04b6 calc: 2.12.9.0 -> 2.12.9.1 2021-03-27 07:21:16 +00:00
Sandro 53734a4355
Merge pull request #117730 from veprbl/pr/snakemake_6_0_5
snakemake: 5.28.0 -> 6.0.5
2021-03-27 02:44:44 +01:00
Dmitry Kalinkin 8887f4655e
snakemake: 5.28.0 -> 6.0.5 2021-03-26 18:32:26 -04:00
Gabriel Ebner 109d6b3bdb
Merge pull request #117712 from gebner/elan0110
elan: 0.10.3 -> 0.11.0
2021-03-26 19:58:29 +01:00
Dominic Steinitz 9eb60bee0e Fix https://github.com/NixOS/nixpkgs/issues/117715 2021-03-26 18:18:42 +00:00
Gabriel Ebner 0661cf4882 elan: 0.10.3 -> 0.11.0
Also adapt the patchelf patch from rustup, since Lean 4 now dynamically
links to gmp.
2021-03-26 19:16:33 +01:00
R. RyanTM 49e4c1e323 picard-tools: 2.25.0 -> 2.25.1 2021-03-26 03:16:44 +00:00
Mario Rodas 01f3ceeaa9
Merge pull request #116630 from r-ryantm/auto-update/lean
lean: 3.27.0 -> 3.28.0
2021-03-25 19:15:00 -05:00
Florian Klink 7d19272ef2
Merge pull request #115820 from flokli/xmedcon
xmedcon: init at 0.21.0
2021-03-25 23:01:58 +01:00
Dmitry Kalinkin bf5c995ad2
Merge pull request #116487 from veprbl/pr/professor_init
professor: init at 2.3.3
2021-03-25 16:07:55 -04:00
R. RyanTM 3b3f141837 marvin: 21.2.0 -> 21.3.0 2021-03-25 17:58:45 +00:00
Frederik Rietdijk 5a5cb718a5 bedtools: use python3 2021-03-25 10:42:32 +01:00
Frederik Rietdijk 2c00aed6b1 bcftools: use python3 2021-03-25 10:39:47 +01:00
Timo Kaufmann 82e1bfa53d
Merge pull request #117123 from collares/cypari-update
cypari2, cysignals: updates
2021-03-24 21:38:04 +00:00
Sandro 489ca6979e
Merge pull request #117335 from bzizou/spades
SPAdes: 3.15.1 -> 3.15.2 + fix license and platform
2021-03-24 19:54:23 +01:00
Mauricio Collares 812ffed96b gap: backport aarch64 patch 2021-03-23 22:09:29 -03:00
Mauricio Collares 594eda3b7d sage: patch intermittently failing test 2021-03-23 22:09:29 -03:00
Mauricio Collares 15fd117e71 cypari2: 2.1.1 -> 2.1.2
* cypari2: 2.1.1 -> 2.1.2, patch to fix segfault

* sage: update test expectations
2021-03-23 22:09:29 -03:00
Ryan Mulligan db21819e91
Merge pull request #117345 from r-ryantm/auto-update/jmol
jmol: 14.31.34 -> 14.31.35
2021-03-23 09:14:57 -07:00
R. RyanTM 8ab6893632 jmol: 14.31.34 -> 14.31.35 2021-03-23 11:29:06 +00:00
Bruno Bzeznik f0eef16f9c SPAdes: 3.15.1 -> 3.15.2 + fix license and platform 2021-03-23 10:51:01 +01:00
Paul Liétar 6f8eb1e65a coq: enable coqide on darwin
This was disabled a while ago, when itstool was broken on darwin.
Now that itstool works again, it can be re-enabled.
2021-03-23 08:17:13 +01:00
mtreca ff64acacba sumo: init at 1.8.0 2021-03-22 12:17:15 +01:00
Sandro 1c3d923aaa
Merge pull request #115685 from r-ryantm/auto-update/wxmaxima
wxmaxima: 20.06.6 -> 21.02.0
2021-03-22 01:08:42 +01:00
Sandro 593cc0d5ee
Merge pull request #111224 from r-ryantm/auto-update/gwyddion
gwyddion: 2.56 -> 2.57
2021-03-21 05:22:26 +01:00
Florian Klink 275cc4e9c7 xmedcon: init at 0.21.0
This allows reading DICOM images, including 3d stacks.
2021-03-20 21:36:38 +01:00
Sandro edac82660c
Merge pull request #117039 from raboof/gnucap-init-at-20210107
gnucap: init at 20210107
2021-03-20 19:49:27 +01:00
Arnout Engelen 52b7bd1e77
gnucap: init at 20210107
Submitting on behalf of kvtb,
https://discourse.nixos.org/t/casual-nixpkgs-contributions/9607/13
2021-03-20 16:36:48 +01:00
Mauricio Collares c0b869f19f sage: re-add pkgconfig input, it's not duplicated 2021-03-20 06:43:23 -03:00
github-actions[bot] c804f22a81
Merge master into staging-next 2021-03-19 12:26:52 +00:00
Doron Behar 23ef497c17
Merge pull request #111237 from r-ryantm/auto-update/gtkwave
gtkwave: 3.3.107 -> 3.3.108
2021-03-19 10:24:36 +00:00
github-actions[bot] 6ffd2fe000
Merge master into staging-next 2021-03-19 06:17:55 +00:00
Jack Gerrits a364fb6557 vowpal-wabbit: init at 8.9.2 2021-03-18 18:41:07 -07:00
Jan Tojnar 2445e9a681
Merge branch 'master' into staging-next 2021-03-18 19:24:39 +01:00
Thomas Mader 09acdfde94
sambamba: 0.7.1 -> 0.8.0
Getting rid of dmd dependency and compile with ldc
2021-03-18 17:41:30 +02:00
Jan Tojnar 0136206b12
Merge branch 'master' into staging-next 2021-03-18 13:35:59 +01:00
R. RyanTM fadcc52955 lean: 3.27.0 -> 3.28.0 2021-03-17 14:16:02 +00:00
Sandro fe4a249718
Merge pull request #116594 from NixOS/SuperSandro2000-patch-1
sage: remove duplicated pkgconfig
2021-03-17 11:10:10 +01:00
Sandro 2d01f4a96a
sage: remove duplicated pkgconfig 2021-03-17 09:24:07 +01:00
Samuel Gräfenstein d90e7ac2e1
kicad: gnome3.dconf -> dconf
Fix building with `config.allowAliases = false;`.
2021-03-17 00:00:17 +01:00
Samuel Gräfenstein b72ee5775c
treewide: gnome2.gtk -> gtk2
Fix building with `config.allowAliases = false;`.
2021-03-17 00:00:16 +01:00
Samuel Gräfenstein 672cd0c8e7
treewide: gnome3.gtkmm -> gtkmm3
Fix building with `config.allowAliases = false;`.
2021-03-17 00:00:15 +01:00
Samuel Gräfenstein 9517398973
treewide: gnome3.defaultIconTheme -> gnome3.adwaita-icon-theme
Fix building with `config.allowAliases = false;`.
2021-03-17 00:00:15 +01:00
Dmitry Kalinkin 7adf3f8127
professor: init at 2.3.3 2021-03-16 11:14:00 -04:00
github-actions[bot] c7b23f6440
Merge master into staging-next 2021-03-14 18:17:08 +00:00
R. RyanTM 7c14c1a8d0 pcb: 4.2.2 -> 4.3.0 2021-03-14 13:34:35 -04:00
Martin Weinelt 0241873f7f
Merge branch 'master' into staging-next 2021-03-14 17:35:32 +01:00
mucaho ddf1821112 tla-toolbox: 1.7.0 -> 1.7.1
* updates package version
* fixes #114741
* fixes TLC model check call
2021-03-14 12:27:35 -04:00
Ryan Mulligan 0e63a1bb33
Merge pull request #115579 from r-ryantm/auto-update/stacks
stacks: 2.53 -> 2.55
2021-03-14 07:47:22 -07:00
Ryan Mulligan 03754f91eb
Merge pull request #115574 from r-ryantm/auto-update/SPAdes
SPAdes: 3.14.1 -> 3.15.1
2021-03-14 07:46:58 -07:00
github-actions[bot] 3b97019142
Merge master into staging-next 2021-03-14 06:17:28 +00:00
R. RyanTM 29bf7e2b89 jmol: 14.31.32 -> 14.31.34 2021-03-14 01:06:53 -05:00
R. RyanTM 621f19d89c calc: 2.12.8.2 -> 2.12.9.0 2021-03-13 23:43:28 -05:00
github-actions[bot] d6257d451b
Merge master into staging-next 2021-03-11 18:23:54 +00:00
Guillaume Girol a72148f3bc
Merge pull request #114881 from collares/sage-dependencies
sage dependency updates
2021-03-11 17:52:16 +00:00
github-actions[bot] 6a3a358b0d
Merge master into staging-next 2021-03-10 18:23:15 +00:00
Austin Seipp b54b679c90
Merge pull request #115717 from r-ryantm/auto-update/verilator
verilator: 4.108 -> 4.110
2021-03-10 08:49:38 -06:00
github-actions[bot] aea4725648
Merge master into staging-next 2021-03-10 12:21:24 +00:00
Sandro bb0bb13f32
Merge pull request #115621 from jbedo/octopus
octopus: 0.7.0 -> 0.7.1
2021-03-10 10:03:42 +01:00
R. RyanTM 5a9a1b3545 verilator: 4.108 -> 4.110 2021-03-10 07:47:54 +00:00
R. RyanTM 6dc1177c24 wxmaxima: 20.06.6 -> 21.02.0 2021-03-10 03:37:07 +00:00
github-actions[bot] 149a81c88d
Merge master into staging-next 2021-03-10 00:39:07 +00:00
Mauricio Collares f80271c7f0 sage: remove usage of deprecated numpy aliases 2021-03-09 21:28:46 -03:00
Mauricio Collares 3f02cdae14 sage: reenable pexpect interrupt test 2021-03-09 21:28:46 -03:00
Mauricio Collares edc78bb31f sage: update test expectations for arb and giac, prepare for pari 2.13 2021-03-09 20:54:55 -03:00
Mauricio Collares a0f55e48fa sage: use fetchSageDiff whenever possible 2021-03-09 20:54:55 -03:00
R. RyanTM 4142ae19e8 palp: 2.11 -> 2.20 2021-03-09 20:54:55 -03:00
Mauricio Collares d508147edc giac: 1.5.0-87 -> 1.6.0-47 2021-03-09 20:54:55 -03:00
R. RyanTM c0c700cb99 hal-hardware-analyzer: 3.2.5 -> 3.2.6 2021-03-09 15:29:51 -08:00
Justin Bedo 4e1a560ae4
octopus: 0.7.0 -> 0.7.1 2021-03-10 08:44:18 +11:00
R. RyanTM cb9f13c609 stacks: 2.53 -> 2.55 2021-03-09 17:19:55 +00:00
R. RyanTM 95d96bbfe5 SPAdes: 3.14.1 -> 3.15.1 2021-03-09 17:01:01 +00:00
Martin Weinelt 16f9e4da3a
Merge branch 'master' into staging-next 2021-03-09 17:05:41 +01:00
R. RyanTM 97a6e6e702 qalculate-gtk: 3.16.0 -> 3.17.0 2021-03-09 09:26:04 +00:00
github-actions[bot] dd7cbca2a6
Merge master into staging-next 2021-03-09 06:17:35 +00:00
Mario Rodas 7e99e0f339
Merge pull request #115404 from r-ryantm/auto-update/gmsh
gmsh: 4.7.1 -> 4.8.0
2021-03-08 19:45:08 -05:00
github-actions[bot] 3db2dee35f
Merge master into staging-next 2021-03-09 00:39:09 +00:00
R. RyanTM da4b660561 jmol: 14.31.24 -> 14.31.32 2021-03-08 15:48:47 -05:00
github-actions[bot] 5c2a7abde7
Merge master into staging-next 2021-03-08 18:22:56 +00:00
Frederik Rietdijk 277d488026 Merge staging into staging-next 2021-03-08 19:20:18 +01:00
Ryan Mulligan 91056dcd70
Merge pull request #115122 from r-ryantm/auto-update/messer-slim
messer-slim: 3.2.1 -> 3.6
2021-03-08 07:16:00 -08:00
R. RyanTM 435eaafaf1 gmsh: 4.7.1 -> 4.8.0 2021-03-08 11:54:52 +00:00
Sandro Jäckel 0207c32eff
giac: remove ? null 2021-03-08 02:01:15 +01:00
Sandro Jäckel b7befb3522
palp: format 2021-03-08 02:01:15 +01:00
github-actions[bot] 65cddb74d7
Merge staging-next into staging 2021-03-07 06:17:25 +00:00
Sandro 7e8cfa2c1b
Merge pull request #114747 from collares/eclib-update 2021-03-07 02:26:42 +01:00
github-actions[bot] f9d4095295
Merge staging-next into staging 2021-03-07 00:41:13 +00:00
Ryan Mulligan b20e5c31f6
Merge pull request #115010 from r-ryantm/auto-update/kstars
kstars: 3.5.1 -> 3.5.2
2021-03-06 16:39:59 -08:00
Mauricio Collares ef615b5a61 sage: adapt for eclib output format changes 2021-03-06 12:28:52 -03:00
github-actions[bot] ed3d50b6ce
Merge staging-next into staging 2021-03-05 06:17:28 +00:00
Sandro 2c0e6a0e69
Merge pull request #114586 from hjones2199/indi-full 2021-03-05 04:25:48 +01:00
Jan Tojnar 6d1958ad2d
Merge branch 'staging-next' into staging 2021-03-04 22:16:45 +01:00
R. RyanTM 12cde5ea85 messer-slim: 3.2.1 -> 3.6 2021-03-04 18:40:37 +00:00
Sandro 13a3551cec
Merge pull request #115041 from SuperSandro2000/r
R: switch to pname + version
2021-03-04 13:38:16 +01:00
Lio李歐 51512d843a
quantum-espresso: enable on darwin 2021-03-03 19:40:47 -08:00
Sandro Jäckel 086e9e0978
R: switch to pname + version 2021-03-04 03:47:33 +01:00
R. RyanTM c340d7c85d kstars: 3.5.1 -> 3.5.2 2021-03-03 18:28:16 +00:00
sternenseemann 6f2fbf5f0b treewide: add missing lib inputs
This fixes hopefully all remaining missing lib inputs, likely introduced
as a regression by our recent treewide switch from stdenv.lib to lib.
These instances are all I could find using nix-instantiate --parse using
the following command:

    find "$NIXPKGS" -name '*.nix' \
      -and ! -path "$NIXPKGS/pkgs/development/interpreters/python/cpython/docs/template.nix" \
      -and ! -path '$NIXPKGS/.git/**' \
      -print0 | xargs -0 nix-instantiate --parse >/dev/null
2021-03-03 13:40:45 +01:00
github-actions[bot] eef2c4e401
Merge staging-next into staging 2021-03-03 00:38:15 +00:00
Eduardo Sánchez Muñoz b1718d879a
librepcb: fix use of wrapQtApp (#114891) 2021-03-03 01:03:37 +01:00
github-actions[bot] e668a36492
Merge staging-next into staging 2021-03-02 12:17:32 +00:00
Vincent Laporte cd43a53947 coq_8_13: 8.13.0 → 8.13.1 2021-03-02 09:04:40 +01:00
Jan Tojnar 913394a1d9
Merge branch 'staging-next' into staging 2021-03-01 19:30:56 +01:00
R. RyanTM 4dd9084ca9 lean: 3.26.0 -> 3.27.0 2021-02-28 15:14:35 +00:00
Hunter Jones 62249b7904 kstars: update license to gpl2Plus 2021-02-27 15:11:20 -06:00
Hunter Jones 18040bda9b phd2: use third party indi drivers 2021-02-27 13:26:17 -06:00
Hunter Jones 9c4e268d65 kstars: use third party indi drivers 2021-02-27 13:25:07 -06:00
github-actions[bot] 5267db2989
Merge staging-next into staging 2021-02-27 18:16:44 +00:00
Sandro 299a683718
Merge pull request #114417 from veprbl/pr/sherpa_darwin_fix
sherpa: fix on darwin
2021-02-27 14:23:38 +01:00
github-actions[bot] 2a38839b78
Merge staging-next into staging 2021-02-27 12:20:00 +00:00
Sandro 7918f4b407
Merge pull request #114539 from SuperSandro2000/z3-java
z3: Add output for Java bindings (*.jar and *.so)
2021-02-27 11:15:31 +01:00
Lorenz Leutgeb 7306864977
z3: Add output for Java bindings (*.jar and *.so) 2021-02-27 09:01:25 +01:00
github-actions[bot] 52f404b187
Merge staging-next into staging 2021-02-27 06:17:01 +00:00
R. RyanTM 4d89f50881 jmol: 14.31.18 -> 14.31.24 2021-02-26 21:10:01 -05:00
github-actions[bot] e8162c62e3
Merge staging-next into staging 2021-02-27 00:37:54 +00:00
Vijay Lulla 2c9d7ee369 R: 4.0.3 -> 4.0.4 2021-02-26 22:42:21 +00:00
Guillaume Girol b4389c0736
Merge pull request #114271 from hjones2199/siril
siril: 0.99.6 -> 0.99.8.1
2021-02-26 20:25:19 +00:00
github-actions[bot] ec3729e487
Merge staging-next into staging 2021-02-26 18:16:46 +00:00
Timo Kaufmann be504fc82a
Merge pull request #113603 from collares/sage-test-fixes
sage: disable intermittent test and fix threejs breakage
2021-02-26 13:27:44 +00:00
Robert Schütz 54757b35c1 Merge branch 'staging-next' into staging 2021-02-26 10:56:17 +01:00
Frederik Rietdijk c456a2512f Merge master into staging-next 2021-02-26 10:25:13 +01:00
Mauricio Collares 4718aea896 sage: use slightly more robust way of getting threejs version 2021-02-25 22:31:27 -03:00
Mauricio Collares 7efa803a4b sage: disable intermittent test 2021-02-25 22:31:27 -03:00
Dmitry Kalinkin 5b9a3edb20 sherpa: fix on darwin
Fixes: 81cf1908 ('sherpa: fix build w/glibc-2.32')
2021-02-25 17:24:13 -05:00
Hunter Jones 804999f37e siril: 0.99.6 -> 0.99.8.1 2021-02-25 10:46:05 -06:00
Eduardo Sánchez Muñoz ade1748bd8
diylc: 4.15.1 -> 4.17.0 (#114260)
* diylc: set eduardosm as maintainer

* diylc: 4.15.1 -> 4.17.0

* diylc: run preInstall and postInstall hooks
2021-02-25 09:14:51 +01:00
Mario Rodas 9a6f587ab8
Merge pull request #114100 from r-ryantm/auto-update/star
star: 2.7.7a -> 2.7.8a
2021-02-24 22:36:58 -05:00
Vincent Laporte a346c68411 acgtk: 1.5.1 → 1.5.2 2021-02-24 08:13:06 +01:00
Vladimir Serov f4eddc2fad hol: 10 -> 14
also cleared broken status; builds on NixOS

Signed-off-by: Vladimir Serov <me@cab404.ru>
2021-02-23 21:31:26 -05:00
Mario Rodas 19d38d712a
Merge pull request #112945 from r-ryantm/auto-update/ngspice
ngspice: 33 -> 34
2021-02-23 20:40:05 -05:00
Vincent Laporte f9a4e6b1e2 alt-ergo: use Dune 2 2021-02-23 22:11:44 +01:00
R. RyanTM 615ff1b2ab star: 2.7.7a -> 2.7.8a 2021-02-23 10:38:00 +00:00
Sandro ad06c82b9c
Merge pull request #113965 from SuperSandro2000/fix-collection17 2021-02-23 08:44:14 +01:00
Fabian Affolter a3343fc6b9 calc: specify license 2021-02-22 14:21:33 -05:00
github-actions[bot] ed07c63105
Merge staging-next into staging 2021-02-22 06:17:08 +00:00
github-actions[bot] 227aa2c9b0
Merge master into staging-next 2021-02-22 06:17:05 +00:00
Thomas Bereknyei d3833fbe25 calc: nixpkgs-review fixes 2021-02-22 00:56:59 -05:00
R. RyanTM 840822c280 calc: 2.12.8.1 -> 2.12.8.2 2021-02-22 00:56:59 -05:00
davidak 3bbd4267ab
Merge pull request #112951 from rmcgibbo/cbc
cbc: 2.10.3 -> 2.10.4
2021-02-22 05:02:25 +01:00
Sandro Jäckel dcc2d18867
nasc: remove unused input 2021-02-22 02:27:56 +01:00
Sandro Jäckel af5886a2a3
kicad: remove unused inputs 2021-02-22 02:27:52 +01:00
R. RyanTM ff27c8e0ad last: 1178 -> 1179 2021-02-21 21:24:17 +00:00
github-actions[bot] 41e65d4eb6
Merge staging-next into staging 2021-02-21 06:16:34 +00:00
github-actions[bot] 2c8fa86436
Merge master into staging-next 2021-02-21 06:16:32 +00:00
davidak c7c0037cf2
Merge pull request #109476 from CRTified/aliza_bump
aliza: 1.98.32 -> 1.98.43
2021-02-21 04:35:57 +01:00
Ben Siraphob 127733211e
treewide: unzip buildInputs to nativeBuildInputs (#112302) 2021-02-20 16:01:53 -05:00
Robert T. McGibbon 40062e431b cbc: 2.10.3 -> 2.10.4 2021-02-20 15:41:18 -05:00
github-actions[bot] abe7db36a4
Merge staging-next into staging 2021-02-20 00:36:40 +00:00
Sandro 41edfe8c20
Merge pull request #113295 from siraben/cc-eq-cc 2021-02-19 19:25:41 +01:00
github-actions[bot] daab056dd9
Merge staging-next into staging 2021-02-19 18:16:58 +00:00
Ben Siraphob 223f25cf4a treewide: add targetPrefix to hardcoded references to CC=cc 2021-02-20 01:01:46 +07:00
AndersonTorres 111256a480 dap: init at 3.10 2021-02-19 10:24:24 -03:00
Ben Siraphob e03c068af5 treewide: makeWrapper buildInputs to nativeBuildInputs 2021-02-19 20:09:16 +07:00
Ryan Mulligan 110d893946
Merge pull request #113524 from r-ryantm/auto-update/MAVProxy
mavproxy: 1.8.32 -> 1.8.34
2021-02-18 20:59:29 -08:00
Sandro 0524156446
Merge pull request #113552 from r-ryantm/auto-update/calc
calc: 2.12.7.6 -> 2.12.8.1
2021-02-18 20:05:53 +01:00
R. RyanTM 71e52071fc calc: 2.12.7.6 -> 2.12.8.1 2021-02-18 06:00:33 +00:00
R. RyanTM 4450456fbc mavproxy: 1.8.32 -> 1.8.34 2021-02-17 22:46:44 +00:00
github-actions[bot] f68cf6f574
Merge master into staging-next 2021-02-17 12:20:00 +00:00
SCOTT-HAMILTON 22ecdf7051
hal-hardware-analyzer: 3.1.9 -> 3.2.5 (#112414)
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2021-02-17 11:26:19 +01:00
github-actions[bot] 0e0fae3ebf
Merge master into staging-next 2021-02-15 06:16:49 +00:00
idontgetoutmuch 5eabb050be
R: fix dylib install_name (#113002)
Co-authored-by: zseri <zseri.devel@ytrizja.de>
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2021-02-15 03:08:02 +01:00
github-actions[bot] 318f95e4c2
Merge master into staging-next 2021-02-13 06:16:33 +00:00
Ryan Mulligan 29dcf53a55
Merge pull request #112817 from r-ryantm/auto-update/picard-tools
picard-tools: 2.24.2 -> 2.25.0
2021-02-12 19:42:16 -08:00
Ryan Mulligan 14e3b9ebc0
Merge pull request #112766 from r-ryantm/auto-update/MAVProxy
mavproxy: 1.8.31 -> 1.8.32
2021-02-12 19:41:45 -08:00
Sandro Jäckel 2a342932d3
verilog: Disable tests on darwin 2021-02-13 01:07:43 +01:00
R. RyanTM edba482e23 ngspice: 33 -> 34 2021-02-12 22:33:55 +00:00
R. RyanTM d1067751c6 picard-tools: 2.24.2 -> 2.25.0 2021-02-11 21:10:44 +00:00
R. RyanTM 1d8764676c mavproxy: 1.8.31 -> 1.8.32 2021-02-11 12:26:47 +00:00
github-actions[bot] 9185e731d2
Merge master into staging-next 2021-02-11 12:20:09 +00:00
github-actions[bot] 3f38ab888e
Merge master into staging-next 2021-02-11 06:16:35 +00:00
David Anderson 6f1319a4d6 symbiyosys: fix the interpreter of the sby binary.
Signed-off-by: David Anderson <dave@natulte.net>
2021-02-10 18:45:44 -08:00
R. RyanTM be145107b3 marvin: 21.1.0 -> 21.2.0 2021-02-10 14:38:25 +00:00
github-actions[bot] bb5521a62c
Merge master into staging-next 2021-02-10 12:20:06 +00:00
Fabian Affolter 5247884859 z3: 4.8.9 -> 4.8.10 2021-02-09 12:07:38 +01:00
github-actions[bot] 30dddce5e8
Merge master into staging-next 2021-02-09 06:16:02 +00:00
Mario Rodas f9a095da28
Merge pull request #112191 from r-ryantm/auto-update/star
star: 2.7.6a -> 2.7.7a
2021-02-08 20:17:49 -05:00
github-actions[bot] 1c86cb40e9
Merge master into staging-next 2021-02-08 00:36:16 +00:00
Ryan Mulligan 64c446d0ba
Merge pull request #112021 from r-ryantm/auto-update/picard-tools
picard-tools: 2.24.1 -> 2.24.2
2021-02-07 14:57:32 -08:00
github-actions[bot] 194e4e6f80
Merge master into staging-next 2021-02-07 06:16:10 +00:00
Martin Weinelt f8709117c8
Merge pull request #112107 from r-ryantm/auto-update/calc
calc: 2.12.7.2 -> 2.12.7.6
2021-02-07 02:58:17 +01:00
github-actions[bot] aaaf1218bf
Merge master into staging-next 2021-02-07 00:37:36 +00:00
Sandro 6f67b153d2
Merge pull request #112196 from lopsided98/qgroundcontrol-update
qgroundcontrol: 4.0.11 -> 4.1.1
2021-02-07 01:14:58 +01:00
Maximilian Bosch 5eae53dc5a
Merge pull request #112192 from r-ryantm/auto-update/stellarium
stellarium: 0.20.3 -> 0.20.4
2021-02-06 21:48:15 +01:00
Ben Wolsieffer 9a635d38b6 qgroundcontrol: 4.0.11 -> 4.1.1 2021-02-06 15:15:22 -05:00
R. RyanTM c0df733c0b stellarium: 0.20.3 -> 0.20.4 2021-02-06 19:58:37 +00:00
R. RyanTM ef6ed50cb4 star: 2.7.6a -> 2.7.7a 2021-02-06 19:50:22 +00:00
Orivej Desh 8d0af26e1d blast: 2.10.0 -> 2.11.0
Fixes build with gcc10.
2021-02-06 19:20:56 +00:00
R. RyanTM 390c686021 calc: 2.12.7.2 -> 2.12.7.6 2021-02-06 08:43:11 +00:00
R. RyanTM 0adfe0f108 picard-tools: 2.24.1 -> 2.24.2 2021-02-05 12:35:00 +00:00
Jan Tojnar da66296930
Merge branch 'staging-next' into staging
libkeyfinder no longer uses Qt so dontWrapQtApps is moot.
2021-02-04 19:34:26 +01:00
Lucas Ransan c0726b30b6
rofi-calc: 1.9 -> 2.0.0 2021-02-04 13:40:34 +01:00
github-actions[bot] 571eb10996
Merge staging-next into staging 2021-02-03 18:22:22 +00:00
Sandro 9a15b4dd19
Merge pull request #111697 from AndersonTorres/chemtool 2021-02-03 14:45:50 +01:00
github-actions[bot] 8ab0b85ead
Merge staging-next into staging 2021-02-03 12:22:13 +00:00
AndersonTorres 7e481eed2d chemtool: init at 1.6.14 2021-02-03 08:48:32 -03:00
Jarl G. Taxerås Flaten 813d14b9b7
coq: 8.13+beta1 -> 8.13.0 (#109479) 2021-02-03 08:34:47 +01:00
github-actions[bot] d867b6f9eb
Merge staging-next into staging 2021-02-03 06:18:15 +00:00
Ryan Mulligan e51d3443c8
Merge pull request #110971 from r-ryantm/auto-update/MAVProxy
mavproxy: 1.8.30 -> 1.8.31
2021-02-02 17:35:03 -08:00
Jan Tojnar 75153ede17
Merge branch 'staging-next' into staging 2021-02-02 19:46:31 +01:00
Sandro Jäckel 6ad10c3bcd
treewide: Remove doBuild cause it does not exist 2021-02-02 14:46:06 +01:00
github-actions[bot] 4c1eae9176
Merge staging-next into staging 2021-02-02 00:42:42 +00:00
wucke13 e4696feefc apmplanner2: 2.0.28-rc1 -> 2.0.28 2021-02-01 19:41:39 +01:00
github-actions[bot] 7044cd0c9d
Merge staging-next into staging 2021-02-01 18:31:04 +00:00
Markus Kowalewski d23e5ca0b4
openmolcas: fix license 2021-02-01 13:28:51 +01:00
Markus Kowalewski 8d466ab26a
gpredict: fix license 2021-02-01 13:27:39 +01:00
github-actions[bot] 03b81d1bef
Merge staging-next into staging 2021-01-31 18:27:42 +00:00
Markus Kowalewski 56bf82e8a1
molden: fix outdated URLs 2021-01-31 18:08:02 +01:00
github-actions[bot] 81337921f5
Merge staging-next into staging 2021-01-31 00:46:33 +00:00
Sandro d0dc21f539
Merge pull request #110824 from SuperSandro2000/fix-collection5 2021-01-31 00:35:55 +01:00
Daniel Schaefer b85a0ba2c2
Merge pull request #111332 from guserav/horizon-eda
horizon-eda: 1.3.0 -> 1.4.0
2021-01-30 23:21:51 +01:00
Sandro Jäckel ced3ec6ce3
treewide: update permanent url redirects 2021-01-30 21:48:57 +01:00
Mario Rodas b695eadb47
Merge pull request #111234 from r-ryantm/auto-update/gretl
gretl: 2020e -> 2021a
2021-01-30 15:23:52 -05:00
Mario Rodas 540346afa4
Merge pull request #111329 from r-ryantm/auto-update/marvin
marvin: 20.21.0 -> 21.1.0
2021-01-30 15:14:04 -05:00
github-actions[bot] c72ffa864a
Merge staging-next into staging 2021-01-30 18:27:30 +00:00
guserav e8906d6b4a horizon-eda: 1.3.0 -> 1.4.0 2021-01-30 18:30:22 +01:00
R. RyanTM 19842bc24d marvin: 20.21.0 -> 21.1.0 2021-01-30 17:14:01 +00:00
Mario Rodas 6d8b2d71ba
Merge pull request #111278 from r-ryantm/auto-update/last
last: 1170 -> 1178
2021-01-30 10:26:15 -05:00
R. RyanTM ad28c0fb42 last: 1170 -> 1178 2021-01-30 07:52:29 +00:00
R. RyanTM 9da1056eef gtkwave: 3.3.107 -> 3.3.108 2021-01-30 01:46:31 +00:00
R. RyanTM af91d02593 gretl: 2020e -> 2021a 2021-01-30 01:29:56 +00:00
R. RyanTM efb1662586 gwyddion: 2.56 -> 2.57 2021-01-29 22:49:53 +00:00
R. RyanTM 7a939f1db3 dcmtk: 3.6.5 -> 3.6.6 2021-01-29 16:43:50 +00:00
github-actions[bot] c367646dd4
Merge staging-next into staging 2021-01-29 12:23:58 +00:00
Gabriel Ebner b7fe801cce
Merge pull request #111117 from r-ryantm/auto-update/lean
lean: 3.25.0 -> 3.26.0
2021-01-29 11:04:43 +01:00
github-actions[bot] 4c82d7eb24
Merge staging-next into staging 2021-01-29 06:19:21 +00:00
R. RyanTM fe1239c794 lean: 3.25.0 -> 3.26.0 2021-01-29 05:15:16 +00:00
Sandro d17f76f05a
Merge pull request #108172 from sikmir/geogebra
geogebra: 5-0-609-0 → 5-0-620-0, geogebra6: 6-0-609-0 → 6-0-620-0
2021-01-29 02:19:06 +01:00
github-actions[bot] 798f7b136c
Merge staging-next into staging 2021-01-28 18:30:08 +00:00
Sandro e368149fcd
Merge pull request #111003 from NieDzejkob/isabelle-vampire
isabelle: provide perl LWP for remote_vampire
2021-01-28 18:32:27 +01:00
Jakub Kądziołka df410f8de7
isabelle: provide perl LWP for remote_vampire 2021-01-28 11:05:39 +01:00
R. RyanTM abd5395184 mavproxy: 1.8.30 -> 1.8.31 2021-01-28 00:24:12 +00:00
github-actions[bot] 06efb52369
Merge staging-next into staging 2021-01-27 18:28:34 +00:00
Roland Coeurjoly cbad557fe2
saw-tools: update license (#110920) 2021-01-27 17:52:41 +01:00
Ben Siraphob 82454e9df8 treewide: remove implicit use of stdenv.lib 2021-01-27 20:04:57 +07:00
github-actions[bot] 1b5da764a7
Merge staging-next into staging 2021-01-27 12:24:09 +00:00
Sandro ad97ca4e51
Merge pull request #110912 from siraben/stdenv-lib-inherit
treewide: remove inherited stdenv.lib
2021-01-27 10:28:55 +01:00
Ben Siraphob 3bbad8b041 treewide: remove inherited stdenv.lib 2021-01-27 12:44:43 +07:00
Thomas Tuegel 0e418a1a18
Merge pull request #108888 from ttuegel/feature--staging--qt-no-mkDerivation
Qt: Do not require mkDerivation
2021-01-26 16:24:41 -06:00
Phillip Cloud bba47f95f1 sortmerna: mark broken on darwin 2021-01-26 12:55:33 -05:00
Thomas Tuegel 5590e365e4
qtbase: Check for wrapQtAppsHook in setupHook 2021-01-25 15:56:15 -06:00
Pavol Rusnak a6ce00c50c
treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
Sandro ad445d3728
Merge pull request #110735 from jbedo/bedtools
bedtools: 2.29.2 -> 2.30.0
2021-01-25 11:04:30 +01:00
Ryan Mulligan afebf1cc9a
Merge pull request #110529 from r-ryantm/auto-update/picard-tools
picard-tools: 2.24.0 -> 2.24.1
2021-01-24 18:06:28 -08:00
Justin Bedo d81e79af15
bedtools: 2.29.2 -> 2.30.0 2021-01-25 13:06:22 +11:00
Sandro a36bf6faf9
Merge pull request #101796 from luc65r/pkg/tilp2 2021-01-25 01:11:50 +01:00
Mario Rodas 214d726b92
Merge pull request #110487 from r-ryantm/auto-update/lean
lean: 3.24.0 -> 3.25.0
2021-01-24 10:17:35 -05:00
luc65r 3c5f402e6e
tilp2: init at 1.18 2021-01-24 14:06:41 +01:00
luc65r 99d0610e03
gfm: init at 1.08 2021-01-24 14:06:41 +01:00
volth bc0d605cf1 treewide: fix double quoted strings in meta.description
Signed-off-by: Ben Siraphob <bensiraphob@gmail.com>
2021-01-24 19:56:59 +07:00
Pavol Rusnak 90f7338112
treewide: stdenv.lib -> lib 2021-01-24 01:49:49 +01:00
Markus Kowalewski 6dba41fbcb
mpi: use mpi attribute consistently as the default MPI implementations
Use the attribute mpi to provide a system wide default MPI
implementation. The default is openmpi (as before).
This now allows for overriding the MPI implentation by using
the overlay mechanism. Build all packages with mpich instead
of the default openmpi can now be achived like this:
self: super:
 {
   mpi = super.mpich;
 }

All derivations that have been using "mpi ? null" to provide optional
building with MPI have been change in the following way to allow for
optional builds with MPI:
{ ...
, mpi
, useMpi ? false
}
2021-01-23 12:15:13 +01:00
R. RyanTM e1ea0a237a picard-tools: 2.24.0 -> 2.24.1 2021-01-22 19:10:27 +00:00
R. RyanTM 0119128f9e lean: 3.24.0 -> 3.25.0 2021-01-22 14:11:46 +00:00
sternenseemann 9212e03c13 acgtk: use dune install 2021-01-21 11:26:26 +01:00
Ryan Mulligan 33784b7228
Merge pull request #110086 from r-ryantm/auto-update/marvin
marvin: 20.20.0 -> 20.21.0
2021-01-20 23:38:00 -08:00
zowoq 932941b79c treewide: editorconfig fixes
- remove trailing whitespace
- use spaces for indentation
2021-01-21 13:29:54 +10:00
R. RyanTM 427bbe059a picard-tools: 2.23.9 -> 2.24.0 2021-01-20 20:42:01 +00:00
R. RyanTM 26dba9209f marvin: 20.20.0 -> 20.21.0 2021-01-20 05:27:37 +00:00
zowoq 759a2cd563 ecopcr: use spaces for indentation 2021-01-20 10:53:10 +10:00
zowoq 31f5dd3f36 treewide: editorconfig fixes
- remove trailing whitespace
- use spaces for indentation
2021-01-20 09:11:11 +10:00
R. RyanTM 5eeafdb3ad kstars: 3.5.0 -> 3.5.1 2021-01-19 18:56:23 +00:00
Jonathan Ringer 9bb3fccb5b treewide: pkgs.pkgconfig -> pkgs.pkg-config, move pkgconfig to alias.nix
continuation of #109595

pkgconfig was aliased in 2018, however, it remained in
all-packages.nix due to its wide usage. This cleans
up the remaining references to pkgs.pkgsconfig and
moves the entry to aliases.nix.

python3Packages.pkgconfig remained unchanged because
it's the canonical name of the upstream package
on pypi.
2021-01-19 01:16:25 -08:00
Jonathan Ringer 200bb8c977 cd-hit: remove non-existent package 2021-01-19 01:16:25 -08:00
Sandro ed2dbbba22
Merge pull request #109771 from r-ryantm/auto-update/delly
delly: 0.8.6 -> 0.8.7
2021-01-18 17:36:01 +01:00
R. RyanTM e776f923e4 elan: 0.10.2 -> 0.10.3 2021-01-18 15:20:28 +00:00
R. RyanTM a0e1bb6a4b delly: 0.8.6 -> 0.8.7 2021-01-18 14:22:30 +00:00
Sandro 0b6f223eec
Merge pull request #104756 from Mazurel/qucs-s
qucs-s: init at 0.0.22
2021-01-18 01:30:34 +01:00
Sandro fe2882e5d3
Merge pull request #107845 from danielbarter/openbabel3 2021-01-18 00:37:32 +01:00
Sandro Jäckel 197eace081
avogadro: update maintainers 2021-01-18 00:21:49 +01:00
Mauricio Scheffer f8b69fa6d2 starspace: init at unstable-2021-01-17 2021-01-17 21:31:55 +00:00
Ben Siraphob badf51221d treewide: stdenv.lib -> lib 2021-01-16 17:58:11 +07:00
yangm2 c7ebdc8123
verilator: 4.100 -> 4.108
Co-authored-by: Austin Seipp <aseipp@pobox.com>
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2021-01-15 21:10:37 -06:00
CRTified f8c06505db aliza: 1.98.32 -> 1.98.43 2021-01-15 21:30:55 +01:00
Sandro 403ea9f27c
Merge pull request #97101 from fricklerhandwerk/wxpython 2021-01-15 10:30:05 +01:00
Michael Raskin d714c53f17
fix mis-merge 2021-01-14 15:26:10 +00:00
Michael Raskin f2210b7287
Merge branch 'master' into remove-opensmt 2021-01-14 14:22:22 +00:00
fricklerhandwerk bb2879d593 mavproxy: fix darwin build 2021-01-14 09:26:12 +01:00
Sandro Jäckel 55444ed07f
nasc: Fix compilation with gcc10 2021-01-11 12:08:20 +01:00
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Jan Tojnar dd72357155
Merge branch 'master' into staging-next 2021-01-10 23:24:33 +01:00
John Ericson 05b5b5491e
Merge pull request #108507 from Ericson2314/ott-mode
ott-mode: Factor our from ott
2021-01-10 14:30:59 -05:00
Nikolay Korotkiy c0575fe0ef
geogebra: 5-0-609-0 → 5-0-620-0, geogebra6: 6-0-609-0 → 6-0-620-0 2021-01-10 20:19:43 +03:00
github-actions[bot] 433c7b069c
Merge master into staging-next 2021-01-10 01:03:35 +00:00
Markus Kowalewski 14caa4b2bf
octopus: 10.0 -> 10.3 2021-01-09 16:32:49 +01:00
Markus Kowalewski 0961d5b998
octopus: update licenses 2021-01-09 16:32:49 +01:00
Michael Weiss 8ae8602bf7
Merge branch 'master' into staging-next
Manually resolved a conflict in
pkgs/development/libraries/libbladeRF/default.nix.
2021-01-09 12:16:11 +01:00
Cyril Cohen 9ffd16b385 coqPackages: refactor 2021-01-09 11:56:17 +01:00
github-actions[bot] ecebf82121
Merge master into staging-next 2021-01-08 12:29:36 +00:00
Gabriel Ebner 5000e5707b
Merge pull request #108717 from Dyazz/libqalculate
libqalculate: 3.14.0 -> 3.16.0
2021-01-08 11:23:31 +01:00
Dyazz 8cdefb6995 qalculate-gtk: 3.15.0 -> 3.16.0 2021-01-08 08:43:39 +01:00
Jan Tojnar e6c0c98940
Merge branch 'master' into staging-next
zynaddsubfx conflict has been updated to 3.0.1, which conflicted with rewrite after 3.0.5 update on a different branch.
2021-01-08 02:07:34 +01:00
Evils 0448f1c082 kicad-unstable: 2020-12-01 -> 2020-12-23 2021-01-07 16:17:41 -05:00
Evils 9be551c1d8 kicad: 5.1.8 -> 5.1.9 2021-01-07 16:17:41 -05:00
Evils 86e29a0b72 kicad: fix update.sh multiple tag reply handling
and fix tabs in update.sh
2021-01-07 16:17:41 -05:00
Sandro 7ae17783a7
Merge pull request #108432 from jbedo/fastp
fastp: init 0.20.1
2021-01-07 21:44:33 +01:00
github-actions[bot] 5c072a088d
Merge master into staging-next 2021-01-07 18:40:50 +00:00
Sandro ec56bf6ede
Merge pull request #106456 from eduardosm/diylc 2021-01-07 17:24:42 +01:00
Jan Tojnar f19eb635b4
Merge branch 'master' into staging-next
b04fc593e7 seems to have accidentally changed mkDerivation function for dfilemanager and solarus-quest-editor so I have reverted that here.
2021-01-07 13:04:31 +01:00
Eduardo Sánchez Muñoz 0d84b3f540 diylc: init at 4.15.1 2021-01-07 12:53:35 +01:00
Justin Bedo bdf3d727ca
fastp: init 0.20.1 2021-01-07 18:24:19 +11:00
Devon Richards 7a16349789
lean: 3.23.0 -> 3.24.0
We have to update to be able to use the current version of mathlib.
2021-01-06 21:38:04 -06:00
Сухарик 4746e1717f
sympy: 1.6.2 -> 1.7.1 (#107663)
* sympy: 1.6.2 -> 1.7.1

* sage: adapt tests to sympy 1.7

Co-authored-by: Mauricio Collares <mauricio@collares.org>
2021-01-06 17:10:30 +00:00
Sandro 0af4d59732
Merge pull request #108437 from jbedo/varscan
varscan: 2.4.2 -> 2.4.4
2021-01-06 00:19:30 +01:00
Sandro 31d6b1cd06
Merge pull request #108435 from jbedo/last
last: 1145 -> 1170
2021-01-06 00:18:41 +01:00
Guillaume Girol f3e84c4d42
Merge pull request #107416 from hjones2199/phd2wrap
phd2: add GApps wrapper to fix breakage on non-nixos wayland systems
2021-01-05 20:09:24 +00:00
John Ericson 4eb13669a0 ott: Don't also install emacs mode
There is now a separate package for that.
2021-01-05 14:41:52 -05:00
Anderson Torres 0972bbc12d
Merge pull request #108445 from AndersonTorres/updates
Misc updates
2021-01-05 11:54:15 -03:00
AndersonTorres e8183d4687 magic-vlsi: 8.3.80 -> 8.3.109
Also, add myself to maintainers list.
2021-01-05 10:49:00 -03:00
Sandro f53c431645
Merge pull request #108379 from SuperSandro2000/cleanups 2021-01-05 02:19:24 +01:00
Justin Bedo 56dd3fa172
varscan: 2.4.2 -> 2.4.4 2021-01-05 10:55:28 +11:00
Justin Bedo 62432c855f
last: 1145 -> 1170 2021-01-05 10:29:31 +11:00
Frederik Rietdijk b20838eb4a Merge staging-next into staging 2021-01-04 20:51:32 +01:00
Pavol Rusnak bf77245202
Merge pull request #108219 from prusnak/viennarna
ViennaRNA: init at 2.4.17
2021-01-04 18:04:56 +01:00
markuskowa d480c86858
Merge pull request #107223 from markuskowa/upd-qe
quantum-espresso: 6.5 -> 6.6
2021-01-04 14:33:37 +01:00