Commit graph

3763 commits

Author SHA1 Message Date
Simonas Kazlauskas dde3e8edf4 nix-prefetch-docker: Add jq into path
Otheriwse running the tool fails with

    line 41: jq: command not found
2020-04-27 22:21:55 +03:00
zimbatm 1bf7f5f240
Merge pull request #85750 from zimbatm/srcOnly-docs
srcOnly: fix invocation and document
2020-04-27 14:49:55 +02:00
zimbatm 31ead7d030
srcOnly: rename buildInputs to nativeBuildInputs
The only reason to pass build inputs is to extend the unpackPhase with
custom unpack commands. Eg: add "unrar" to unpack rar sources. And those
should really be passed as native build inputs. Why? Because
nativeBuildInputs is for dependencies that are used at build time but
will not propagate as runtime dependencies. And also, cross-compilation.
2020-04-27 14:31:40 +02:00
Dmitry Kalinkin f0da3b5e94
Merge pull request #85952 from LnL7/darwin-lapack
lapack: fix darwin library identifiers
2020-04-26 00:39:26 -04:00
Silvan Mosberger eeb4e522b5
Merge pull request #85255 from Infinisil/sanitize-run-command-name 2020-04-25 00:11:41 +02:00
Daiderd Jordan 5ae928e18f
lapack: fix darwin library identifiers
The build system already sets these properly to the absolute path so no
need to patch the libraries on darwin.

    $ otool -D result/lib/liblapacke.dylib
    result/lib/liblapacke.dylib:
    /nix/store/k88gy5s765yn3dc5ws3jbykyvklm7z96-openblas-0.3.8/lib/libopenblasp-r0.3.8.dylib

Fixes #85713
2020-04-24 20:00:56 +02:00
Frederik Rietdijk cff0669a48 Merge master into staging-next 2020-04-23 08:11:16 +02:00
Benjamin Hipple 21be830522
Merge pull request #85799 from matthewbauer/blas-lapack-expand-docs
BLAS/LAPACK fixup and expand docs
2020-04-22 21:56:20 -04:00
Matthew Bauer 5a500ff0ba blas,lapack: use correct name for library
To match the soname, we need to use libblas.so.3, liblapack.so.3.
2020-04-22 12:37:04 -05:00
Frederik Rietdijk 8374a2a0ee Merge master into staging-next 2020-04-22 17:20:20 +02:00
zimbatm bbbc419186
srcOnly: fix invocation and document
Previously, callPackage would try and fill the arguments such as `name`
and `src` which would cause problems if those existed as top-level
attributes. This also makes it clearer what part is the function
signature.

Then document the derivation inline in the code to explain the ellipsis
and various use-cases.
2020-04-22 14:06:28 +02:00
edef e71990711f
Merge pull request #85680 from NixOS/fix-srconly
srcOnly: ignore additional arguments
2020-04-21 22:45:34 +00:00
Frederik Rietdijk 23be4a8b4d Merge master into staging-next 2020-04-21 19:59:56 +02:00
edef 11e13acc46 srcOnly: ignore additional arguments
This reverts commit b32a057425,
which breaks even the most straightforward uses of srcOnly:

    nix-repl> srcOnly guile
    error: anonymous function at /home/src/nixpkgs/pkgs/build-support/src-only/default.nix:1:1 called with unexpected argument 'drvPath', at /home/src/nixpkgs/lib/customisation.nix:69:16

    nix-repl> srcOnly hello
    error: anonymous function at /home/src/nixpkgs/pkgs/build-support/src-only/default.nix:1:1 called with unexpected argument 'drvPath', at /home/src/nixpkgs/lib/customisation.nix:69:16

Link: https://github.com/NixOS/nixpkgs/pull/80903#issuecomment-617172927
2020-04-21 13:20:17 +00:00
Frederik Rietdijk 803b3d296c Merge staging-next into staging 2020-04-21 08:29:51 +02:00
Matthew Bauer 8f58fa044d blas,lapack: symlink headers when using mkl
Some of these are necessary for things like python.pkgs.numexpr
2020-04-21 00:30:44 -05:00
Matthew Bauer 0caa375b4c blas,lapack: provide symlink for libmkl_rt.so
This is needed for numpy to detect mkl correctly.
2020-04-20 23:47:10 -05:00
Matthew Bauer ff2f2644f8 blas,lapack: use isILP64 instead of is64bit
This is a better name since we have multiple 64-bit things that could
be referred to.

LP64  : integer=32, long=64, pointer=64
ILP64 : integer=64, long=64, pointer=64
2020-04-20 16:02:43 -05:00
Matthew Bauer 3c9c894f83 blas,lapack: don’t patchelf
We have some unused RPATHs we don’t want shrunk. These are used in MKL
to dlopen based on architecture.
2020-04-20 15:50:28 -05:00
Lars Jellema 8e79583510 gnat: init at 9.3.0 2020-04-20 14:41:22 +02:00
Sébastien Maret 712bf551d8 blas: fix build on darwin 2020-04-19 23:07:10 +02:00
John Ericson 1ea80c2cc3 Merge remote-tracking branch 'upstream/master' into staging 2020-04-18 15:40:49 -04:00
John Ericson eb4acb6ca9
Merge pull request #85468 from Ericson2314/no-dumpmachine
treewide: Get rid of -dumpmachine in favor of static info
2020-04-18 00:35:19 -04:00
John Ericson e3d50e5cb0 Merge branch 'master' of github.com:NixOS/nixpkgs into staging 2020-04-18 00:10:08 -04:00
Milan Pässler fc5090b315 blas: fix build 2020-04-18 03:06:47 +02:00
John Ericson 33c2a76c5e Merge remote-tracking branch 'upstream/master' into staging 2020-04-17 18:40:51 -04:00
Matthew Bauer d83e9c9573 setup-hooks/audit-blas.sh: init
Add a simple hook that makes sure blas and lapack are linked to the
right place.
2020-04-17 16:24:25 -05:00
Matthew Bauer 43873351ff blas/lapack: add wrapper for “alternative”s of BLAS/LAPACK provider
This is based on previous work for switching between BLAS and LAPACK
implementation in Debian[1] and Gentoo[2]. The goal is to have one way
to depend on the BLAS/LAPACK libraries that all packages must use. The
attrs “blas” and “lapack” are used to represent a wrapped BLAS/LAPACK
provider. Derivations that don’t care how BLAS and LAPACK are
implemented can just use blas and lapack directly. If you do care what
you get (perhaps for some CPP), you should verify that blas and lapack
match what you expect with an assertion.

The “blas” package collides with the old “blas” reference
implementation. This has been renamed to “blas-reference”. In
addition, “lapack-reference” is also included, corresponding to
“liblapack” from Netlib.org.

Currently, there are 3 providers of the BLAS and LAPACK interfaces:

- lapack-reference: the BLAS/LAPACK implementation maintained by netlib.org
- OpenBLAS: an optimized version of BLAS and LAPACK
- MKL: Intel’s unfree but highly optimized BLAS/LAPACK implementation

By default, the above implementations all use the “LP64” BLAS and
LAPACK ABI. This corresponds to “openblasCompat” and is the safest way
to use BLAS/LAPACK. You may received some benefits from “ILP64” or
8-byte integer BLAS at the expense of breaking compatibility with some
packages.

This can be switched at build time with an override like:

    import <nixpkgs> {
        config.allowUnfree = true;
        overlays = [(self: super: {
          lapack = super.lapack.override {
            lapackProvider = super.lapack-reference;
          };
          blas = super.blas.override {
            blasProvider = super.lapack-reference;
          };
        })];
      }

or, switched at runtime via LD_LIBRARY_PATH like:

    $ LD_LIBRARY_PATH=$(nix-build -E '(with import <nixpkgs> {}).lapack.override { lapackProvider = pkgs.mkl; is64bit = true; })')/lib:$(nix-build -E '(with import <nixpkgs> {}).blas.override { blasProvider = pkgs.mkl; is64bit = true; })')/lib ./your-blas-linked-binary

By default, we use OpenBLAS LP64 also known in Nixpkgs as
openblasCompat.

[1]: https://wiki.debian.org/DebianScience/LinearAlgebraLibraries
[2]: https://wiki.gentoo.org/wiki/Blas-lapack-switch
2020-04-17 16:23:55 -05:00
Silvan Mosberger c60e559e13
trivial-builders: Sanitize derivation name
This then supports using functions like writeShellScriptBin with script names
that would be invalid as derivation names
2020-04-15 00:31:57 +02:00
John Ericson c8a6ea5161 Merge remote-tracking branch 'upstream/master' into staging 2020-04-13 22:17:15 -04:00
John Ericson 204d710405 treewide: Get rid of -dumpmachine in favor of static info 2020-04-13 19:26:19 -04:00
Andreas Rammhold 84b91899c3
Merge pull request #85172 from andir/buildRustCrate-proc-macro
buildRustCrate: support proc-macro in default prelude
2020-04-13 23:35:19 +02:00
Matthew Bauer e520d6af29
Merge pull request #84415 from matthewbauer/mb-cross-fixes-april2020
Cross compilation fixes [april 2020]
2020-04-13 16:48:38 -04:00
Andreas Rammhold 310b5f6c34
Merge pull request #84179 from kolloch/build-rust-crate-multi-version-rename
buildRustCrate: Allow version specific dependency renaming + parameter doc
2020-04-13 16:25:16 +02:00
Andreas Rammhold a9fdfebc6b
buildRustCrate: support proc-macro in default prelude 2020-04-13 16:01:21 +02:00
Matthew Bauer 9ef6f1aa99
Merge pull request #84933 from matthewbauer/fix-bazel-copts
build-bazel-package: fix linkopt flags
2020-04-11 15:31:35 -04:00
Matthew Bauer 184cd9f6ff build-bazel-package: fix linkopt flags
These values were incorrect. We need to use NIX_LDFLAGS, not
NIX_LD_FLAGS. Also need to prefix all flags with -Wl, for GCC to
accept it.
2020-04-10 15:41:39 -04:00
Michael Reilly 84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
Peter Kolloch bb660fe228 buildRustCrate: Support versioned crate renames 2020-04-10 00:55:44 +02:00
Peter Kolloch 5f9af254a5 buildRustCrate: Document parameters
I know, heretic, but...

I also know that this is not perfect but it is a good start, I think. It
would be nice if this were part of the automatic "nixdoc" function
reference. I'd like guidance if this should be part of the rust section
or something else.
2020-04-10 00:55:05 +02:00
Matthew Bauer 433d5178ca setup-hooks/auto-patchelf.sh: get prefixed readelf 2020-04-06 16:36:29 -04:00
Elis Hirwing 3b6539896b
Merge pull request #83896 from etu/slim-down-default-php-v3
PHP: Make the default package more sane [v3]
2020-04-05 20:00:03 +02:00
talyz 9ac0d9ad61
php.packages.buildPecl: Introduce built-in extension dependencies
Introduce the internalDeps attribute used by mkExtension, to refer to
internal php extensions built by mkExtension.
2020-04-05 16:44:13 +02:00
Frederik Rietdijk 866c5aa090 Merge master into staging-next 2020-04-05 08:33:39 +02:00
Matthew Bauer eab992b4ac
Merge pull request #83112 from bhipple/dev/reltools-cleanup
releaseTools: no-op expression cleanup
2020-04-04 17:18:28 -05:00
Frederik Rietdijk 92124ed660 Merge master into staging-next 2020-04-03 21:54:40 +02:00
Robert Helgesson bf486f784d
emacs: fix setup-hook
This change fixes byte compilation of, e.g., Helm without breaking
builds using, e.g., `trivialBuild`.

See https://github.com/NixOS/nixpkgs/pull/82604#issuecomment-607201755
2020-04-02 23:04:08 +02:00
Léo Gaspard a3ee24b2ff
Merge pull request #83894 from symphorien/unbreak-os-prober-test
Unbreak os prober test
2020-03-31 22:17:27 +02:00
Jan Tojnar dbb4a47de0
Merge branch 'staging-next' into staging 2020-03-31 21:33:00 +02:00
Jan Tojnar 3e0f4e202f
Merge branch 'master' into staging-next 2020-03-31 21:32:15 +02:00