Commit graph

796 commits

Author SHA1 Message Date
Timo Kaufmann 6dabc28cd0 sage: add compatibility for R 3.6.0
The random number generator seems to have changed. Because of this, a
trivial test adjustment is needed.
2019-04-29 13:37:07 +02:00
Alex Branham 4264ad4c2b R: 3.5.3 -> 3.6.0
The patch is necessary for the test suite to pass without errors. The
fix has already been made upstream but didn't make it into the 3.6.0
release.

Closes https://github.com/NixOS/nixpkgs/pull/60273.
2019-04-29 13:35:21 +02:00
Ben 535c38dd73 GeoGebra: 472 -> 535 (#60272)
* Update GeoGebra

* Update default.nix
2019-04-29 11:25:37 +02:00
Timo Kaufmann 31709b611f R: add timokau as a maintainer
I'm interested in R as a dependency for sage. R changes are likely to
impact sage, so I'd like to get notified on those changes.
2019-04-28 13:20:47 +02:00
Renaud 9f26d537e8
Merge pull request #59516 from r-ryantm/auto-update/gmsh
gmsh: 4.2.2 -> 4.2.3
2019-04-24 20:40:56 +02:00
Timo Kaufmann 9c7f774a39 gap: mark as broken on darwin
Has been failing to build for a while.
2019-04-20 12:36:11 +02:00
Timo Kaufmann af6739fdd7 gap: 4.10.0 -> 4.10.1 2019-04-20 09:54:27 +02:00
Timo Kaufmann 49b8efcb84 sage: 8.6 -> 8.7
https://groups.google.com/forum/#!topic/sage-release/3m8PV9JkFro
2019-04-17 22:44:32 +02:00
Timo Kaufmann e0e5445667 sage: fix another transient sig_on bug
Caused a test failure on hydra, backporting upstream fix.
2019-04-17 19:58:07 +02:00
R. RyanTM 00d17e36ea gmsh: 4.2.2 -> 4.2.3
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/gmsh/versions
2019-04-14 13:15:32 -07:00
Timo Kaufmann 62c288ec20
python.pkgs.sympy: 1.3 -> 1.4 (#59482) 2019-04-14 17:52:03 +02:00
markuskowa 87f595a1f0
Merge pull request #56615 from r-ryantm/auto-update/clp
clp: 1.16.11 -> 1.17.0
2019-04-14 12:05:32 +02:00
Markus Kowalewski 19dfffff3c
clp: restrict to x86_64-linux + darwin 2019-04-14 00:17:25 +02:00
Markus Kowalewski e879991e1b
clp: 1.17.0 -> 1.17.11 2019-04-14 00:04:06 +02:00
Julien Dehos a13f5d0da1 mxnet: fix cuda support enabled build (#48781) 2019-04-12 10:31:22 +00:00
Vladimír Čunát f7ddff5c6d
R: fix regression from commit cbade453 #58989
Normally the directory is created in fixup phase.
2019-04-07 17:38:45 +02:00
rhokue cbade453ac R: explicitly declare which as a run-time dependency
Fixes https://github.com/NixOS/nixpkgs/issues/58963.
Closes https://github.com/NixOS/nixpkgs/pull/58989.
2019-04-07 11:12:43 +02:00
Timo Kaufmann ceede33ddf
python.pkgs.cypari2: 2.0.3 -> 2.1.0 (#59085) 2019-04-06 21:46:13 +00:00
Timo Kaufmann 7f22a42976 nauty: disable cpu feature detection 2019-04-04 14:54:55 +02:00
Timo Kaufmann 15045e6233 nauty: add timokau as a maintainer
I'm interested in this package as a sage dependency.
2019-04-04 14:54:31 +02:00
Timo Kaufmann 5880c449dd nauty: small refactoring 2019-04-04 14:54:05 +02:00
Timo Kaufmann 69555825f8
eclib: 20180815 -> 20190226 (#58801)
Needs a sage patch, see
https://trac.sagemath.org/ticket/27360.
2019-04-02 15:39:20 +00:00
markuskowa 7701fd7603
Merge pull request #58097 from r-ryantm/auto-update/ginac
ginac: 1.7.4 -> 1.7.5
2019-03-29 20:27:39 +01:00
markuskowa 403aa2dfed
Merge pull request #58180 from luzpaz/gmsh4.2.2
gmsh 4.2.1->4.2.2
2019-03-28 18:11:58 +01:00
luz.paz 13158c692c gmsh 4.2.1->4.2.2 2019-03-23 12:51:12 -04:00
Will Dietz 24484b216a qalculate-gtk: 2.9.0 -> 3.0.0
http://qalculate.github.io/news.html
2019-03-23 01:09:17 -05:00
R. RyanTM 34cba0b001 ginac: 1.7.4 -> 1.7.5
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/ginac/versions
2019-03-21 17:54:31 -07:00
worldofpeace 0353967957 nasc: 0.5.1 -> 0.5.2
Main improvment is that libqalculatenasc.so is now properly linked

Changelog: https://github.com/parnold-x/nasc/compare/0.5.1...0.5.2
2019-03-20 23:10:33 -04:00
Timo Kaufmann 5fc5881221
sage: backport bugfix (#57794) 2019-03-17 14:36:01 +00:00
Timo Kaufmann 8fc3c033cb
pynac: 0.7.23 -> 0.7.24 (#57791)
Apparently some python3 related fixes: https://trac.sagemath.org/ticket/27241

Also switch to using pname.
2019-03-17 14:35:28 +00:00
Alex Branham 1e354a7e40 R: 3.5.2 -> 3.5.3
Closes https://github.com/NixOS/nixpkgs/pull/57400.
2019-03-14 19:50:37 +01:00
Timo Kaufmann ce96994032
sage: fix docbuild (#57294)
The docbuild (or rather its tests) failed because sphinx built some
English parts of the documentation in Russian. The added debian patch
fixes that by isolating docbuilding threads in sphinx using
proper subprocesses.
2019-03-10 21:42:54 +00:00
Timo Kaufmann 3b7fb15182
Merge pull request #57126 from timokau/sage-maxima-downgrade
sage: downgrade maxima to 5.41
2019-03-09 20:05:01 +00:00
Timo Kaufmann 23908a0ee3 sage: downgrade maxima to 5.41
See discussion at
82254747af.
2019-03-09 17:23:57 +01:00
luz.paz 77cb537712 gmsh: 4.1.5 -> 4.2.1 2019-03-08 05:24:15 -05:00
Timo Kaufmann e2b287b32a maxima: remove ecl known-failures patch
It doesn't apply anymore since the recent update. Since the testsuite is
completely disabled now, there is little point in rebasing it.
2019-03-07 16:08:10 +01:00
Jörg Thalheim 9b57d852af
Merge pull request #56905 from timokau/pari-fix
pari: fix off-by-one error
2019-03-06 11:00:07 +00:00
Timo Kaufmann a648b8c714 pari: fix off-by-one error
Done by applying upstream patch. Will be included in the next release.

Upstream: https://pari.math.u-bordeaux.fr/cgi-bin/bugreport.cgi?bug=2117
2019-03-05 21:50:44 +01:00
Timo Kaufmann 00fa98f012 pari: add timokau as maintainer
I'm mostly interested in this package because it is a dependency of
sage. I'd like to be notified on changes (which ofBorg will do when I'm
listed as a maintainer).
2019-03-05 20:23:04 +01:00
Timo Kaufmann 5a23cb575e pari: slight refactoring
Use pname, one line per argument.
2019-03-05 20:21:26 +01:00
Peter Simons 1c6a193b3e wxmaxima: update to version 19.03.0 2019-03-05 12:53:05 +01:00
Peter Simons 82254747af maxima: update to version 5.42.2 2019-03-05 12:53:04 +01:00
R. RyanTM 6a987f5730 form: 4.2.0 -> 4.2.1
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/form/versions
2019-03-03 20:49:36 +01:00
Timo Kaufmann 9e3754786b sage: fix strictDeps fallout
See https://github.com/NixOS/nixpkgs/pull/54182 and
https://github.com/NixOS/nixpkgs/pull/55757.
2019-03-03 13:25:40 +01:00
Timo Kaufmann 2de81ee78f sage: patch for pip 19
pip 19 introduced a deprecation warning for python 2.7. Since sage
internally uses pip to query for installed packages, this deprecation
warning will show up at unexpected times. That is ugly and messes with
the testsuite.

Upstream: https://trac.sagemath.org/ticket/27405
2019-03-03 13:21:22 +01:00
R. RyanTM e869b87dbb clp: 1.16.11 -> 1.17.0
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/clp/versions
2019-03-01 16:08:32 -08:00
Frederik Rietdijk 2fcb11a244 Merge staging-next into master 2019-03-01 09:06:20 +01:00
Jörg Thalheim dadc7eb329
treewide: use runtimeShell instead of stdenv.shell whenever possible
Whenever we create scripts that are installed to $out, we must use runtimeShell
in order to get the shell that can be executed on the machine we create the
package for. This is relevant for cross-compiling. The only use case for
stdenv.shell are scripts that are executed as part of the build system.
Usages in checkPhase are borderline however to decrease the likelyhood
of people copying the wrong examples, I decided to use runtimeShell as well.
2019-02-26 14:10:49 +00:00
Vladimír Čunát 71f4ba29a3
Merge branch 'master' into staging-next
Hydra nixpkgs: ?compare=1506218
2019-02-22 17:51:01 +01:00
luz.paz add7b20858 gmsh: 4.1.3 -> 4.1.5 2019-02-21 22:55:48 -05:00