Commit graph

49 commits

Author SHA1 Message Date
Ben Darwin 95439a7e7d hdf5_1_8: remove
- no longer needed as `libminc` has been updated to use the default hdf5
2020-10-06 15:31:20 -04:00
Michael Reilly 84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
tviti 2cfad8fa28
Revert "hdf5-fortran: Mark broken on Darwin" (#80419)
This reverts commit 8836c4d71b.

Closes #79952
2020-02-18 14:52:22 -05:00
R. RyanTM 7f8fb20f57 hdf5: 1.10.5 -> 1.10.6 2020-01-06 05:59:41 -08:00
Thomas Tuegel 734979f794 hdf5: Fix flavored builds with multiple outputs 2019-09-29 11:23:58 +02:00
Thomas Tuegel 6cbf0b4bd2
hdf5: Use multiple outputs to reduce closure size 2019-09-25 13:07:20 -05:00
volth 46420bbaa3 treewide: name -> pname (easy cases) (#66585)
treewide replacement of

stdenv.mkDerivation rec {
  name = "*-${version}";
  version = "*";

to pname
2019-08-15 13:41:18 +01:00
Markus Kowalewski 015888ce7f hdf5: 1.10.4 -> 1.10.5 2019-04-10 18:53:51 +02:00
Markus Kowalewski 99ca454f23
hdf5: add openmpi-4 compatibility patches 2019-02-21 15:08:33 +01:00
R. RyanTM 8684ef15a1 hdf5: 1.10.3 -> 1.10.4 (#50100)
* hdf5: 1.10.3 -> 1.10.4

Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/hdf5-threadsafe/versions

* hdf5: update meta.license

HDF5 is licensed under a BSD 3-clause variant
2018-11-15 17:04:24 +01:00
R. RyanTM fb70ad3d60 hdf5-threadsafe: 1.10.2 -> 1.10.3
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/hdf5-threadsafe/versions.
2018-08-24 03:57:05 -07:00
volth 52f53c69ce pkgs/*: remove unreferenced function arguments 2018-07-21 02:48:04 +00:00
R. RyanTM e9dbe1a2a3 hdf5-threadsafe: 1.10.1 -> 1.10.2
Semi-automatic update generated by https://github.com/ryantm/nixpkgs-update tools.

This update was made based on information from https://repology.org/metapackage/hdf5-threadsafe/versions.

These checks were done:

- built on NixOS
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5diff --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5ls --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5dump --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5mkgrp --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5clear --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5import -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5import -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5repack --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5jam -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5jam --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5jam -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5unjam -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5unjam --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5unjam -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5copy --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5format_convert --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat -h’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat --help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat -V’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5stat --version’ and found version 1.10.2
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5perf_serial help’ got 0 exit code
- ran ‘/nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2/bin/h5cc --help’ got 0 exit code
- found 1.10.2 with grep in /nix/store/29yg9dx5p3ppcvyz7fk2lb14hmmy2slj-hdf5-1.10.2
- directory tree listing: https://gist.github.com/aedb29e367d0b709b77bbdc794b96dd6
2018-04-07 08:36:04 -07:00
Roberto Di Remigio eb43cc569a
hdf5: 1.8.18 -> 1.10.1 2017-11-21 22:08:07 +01:00
Roberto Di Remigio 98a748485e
hdf5_1_8: add fortran2003 option 2017-11-21 22:08:06 +01:00
Roberto Di Remigio 443faefdfb
hdf5_1_8: 1.8.18 -> 1.8.19 2017-11-21 22:08:06 +01:00
Roberto Di Remigio e4ac6f6ab2
hdf5_1_8: init at 1.8.18 2017-11-21 22:08:06 +01:00
Tuomas Tynkkynen 8836c4d71b hdf5-fortran: Mark broken on Darwin
Never succeeded.

https://hydra.nixos.org/build/62044922
2017-09-30 21:29:50 +03:00
Sukant Hajra 82667fee37 hdf5: remove references to stdenv.cc
The build provides as text a summary of the build, including the
absolute path of the compiler used for compilation.  Unfortunately, this
pulls in stdenv.cc as a transitive closure.

So this change just calls remove-references-to as a postInstall step for
the one stdenv.cc dependency.

See #29889 for details.
2017-09-28 10:41:38 +02:00
Tuomas Tynkkynen a7440aa7c6 hdf5: Re-enable on darwin
Oops, ab71280823 intended to only disable hdf5-fortran but also
disabled the others that are fine.
2017-09-22 19:56:49 +03:00
Tuomas Tynkkynen ab71280823 darwin: Disable some packages that have never built successfully
mate.mate-desktop: https://hydra.nixos.org/build/61110037
gdmap: https://hydra.nixos.org/build/61144743
redsocks: https://hydra.nixos.org/build/61123106
resolv_wrapper: https://hydra.nixos.org/build/61121132
ogmtools: https://hydra.nixos.org/build/61108726
mp3info: https://hydra.nixos.org/build/61139015
lxappearance-gtk3: https://hydra.nixos.org/build/61126327
hdf5-fortran: https://hydra.nixos.org/build/61146631
pqiv: https://hydra.nixos.org/build/61124724
2017-09-22 17:25:38 +03:00
Dmitry Kalinkin 8b8e363979 hdfview: init at 2.14
hdf_java: init at 3.3.2
2017-08-22 18:31:39 -04:00
mimadrid 09e0cc7cc7
Update homepage attributes: http -> https
Homepage link "http://.../" is a permanent redirect to "https://.../" and should be updated
https://repology.org/repository/nix_stable/problems
2017-08-03 11:56:15 +02:00
Frederik Rietdijk 3d2cfabad6 hdf5: add comment about multiple outputs 2017-05-29 21:25:42 +02:00
John Ericson 4c0d7da183 Get rid of all with { inherit... } and just used let inherit...
The old forms presumably predates, or were made in ignorance of,
`let inherit`. This way is better style as the scoping as more lexical,
something which Nix can (or might already!) take advantage of.
2017-03-30 03:05:05 -04:00
Lancelot SIX 16eb67ac9c
hdf5: 1.8.16 -> 1.8.18
For release announcement, see
https://support.hdfgroup.org/ftp/HDF5/current18/src/hdf5-1.8.18-RELEASE.txt
2016-12-01 17:23:15 +01:00
Frederik Rietdijk 9d25dc12d9 Revert "hdf5: 1.8.16 -> 1.10.0-patch1"
This reverts commit 1c1a03f0d3.

hdf5 1.10 is not yet supported by all tools/libraries (e.g pytables, a dependency of pandas, requires hdf5 1.8).
2016-08-28 19:28:31 +02:00
David Guibert 1c1a03f0d3 hdf5: 1.8.16 -> 1.10.0-patch1 2016-08-28 11:42:21 +02:00
Tuomas Tynkkynen 21f17d69f6 treewide: Add lots of meta.platforms
Build-tested on x86_64 Linux & Mac.
2016-08-02 21:42:43 +03:00
Frederik Rietdijk 46378eb128 hdf5: propagate optional zlib dependency 2016-07-19 14:12:13 +02:00
Lancelot SIX afa9e26130 pkgs.hdf5: Fix mpi build
@vcunat fixed the assertion (which was his wrong suggestion).
2015-11-20 11:25:47 +01:00
Lancelot SIX 4d28d46c45 hdf5: 1.8.15-patch1 -> 1.8.16 (close #11153) 2015-11-20 11:25:47 +01:00
Vladimír Čunát 6a2a2f4ad5 hdf5: refactor the expression
It's possible enableShared has little impact,
as we pass --disable-static to all packages by default.
2015-11-11 15:17:40 +01:00
Lancelot SIX 27eeb48cd8 pkgs.hdf5: 1.8.14 -> 1.8.15-patch1 2015-10-19 13:07:53 +00:00
Lancelot SIX 924c38214d pkgs.hdf5: Add c++ and fortran variants 2015-10-19 12:57:24 +00:00
Longrin Wischnewski 73aef348bb hdf5: move to a more stable URL 2014-11-18 11:14:17 +01:00
Lengyel Balázs 79fc5bde48 updated hdf5 to version HDF5-1.8.14 2014-11-16 09:27:32 +01:00
Andreas Herrmann 37b064fcc7 hdf5: Optional enableShared flag
Required by h5py in mpi mode.
2014-07-18 22:41:56 +02:00
Andreas Herrmann 8346343aa5 hdf5: Add mpi support
Optionally, build the parallel version of hdf5.
2014-07-18 22:41:55 +02:00
Andreas Herrmann 5a96043637 hdf5: Update to 1.8.13 2014-06-22 20:05:20 +02:00
Andreas Herrmann d1f7bc7bcf hdf5: Add szip as an optional dependency
This adds additional compression modes to hdf5.

Note: The szip license may not be compatible with everyone's use case. Hence,
it is an optional dependency.
2014-06-22 20:05:20 +02:00
Andreas Herrmann 4528ebf509 hdf5: Add zlib as optional dependency
This adds addition compression modes to the hdf5 library.

I am adding this, because pytables depends on it.
2014-06-22 20:05:20 +02:00
Bjørn Forsman 083d0890f5 More description fixes
* Remove package name
* Start with upper case letter
* Remove trailing period

Also reword some descriptions and move some long descriptions to
longDescription.

I'm not touching generated packages.
2013-10-06 12:01:38 +02:00
Evgeny Egorochkin 9a3d4fba5e hdf5: fix version to match tarball 2013-07-14 02:08:49 +03:00
Evgeny Egorochkin 9c6f7cc9c1 Add package versions to some of the packages or fix existing ones to conform to nixpkgs conventions. 2013-06-07 03:15:45 +03:00
Cillian de Róiste 7f8ecc65ac hdf5: download URL no longer available for 1.8.5, upgrade to 1.8.10 2013-04-11 10:54:31 +02:00
Michael Raskin 2b1fe76307 Mandatory HDF5 sub-minor-version update with no old version copies around
svn path=/nixpkgs/trunk/; revision=25159
2010-12-16 20:19:43 +00:00
Rob Vermaas ec5dba7620 remove commented license attribute
svn path=/nixpkgs/trunk/; revision=22862
2010-08-02 09:09:25 +00:00
Rob Vermaas fb6ca79d35 HDF5 1.8.5
svn path=/nixpkgs/trunk/; revision=22861
2010-08-02 08:58:53 +00:00