Commit graph

429 commits

Author SHA1 Message Date
Frederik Rietdijk f137783927 Merge master into staging-next 2019-05-01 11:45:46 +02:00
R. RyanTM 16e1d009e0 ipopt: 3.12.12 -> 3.12.13
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/ipopt/versions
2019-05-01 11:11:28 +02:00
Markus Kowalewski 6968c4f305 openblas: turn off AVX512 optimizations
The AVX512 optimization has a bug in openblas-0.3.5
and can also lead to slower code on Xeon Silver CPUs.

See https://github.com/xianyi/OpenBLAS/issues/1955
and https://github.com/xianyi/OpenBLAS/issues/2029
2019-04-27 07:07:49 +02:00
Matthew Bauer 87944c3125
Merge pull request #56744 from matthewbauer/macos-10-12
Update macOS to 10.12
2019-04-26 22:20:03 -04:00
Matthew Bauer 63831c398a python-fenics: put pytest in nativeBuildInputs 2019-04-26 21:55:10 -04:00
Renaud 6186a6f012
Merge pull request #58484 from sveitser/cudnn-v7.4.2
cudnn_cudatoolkit_10: 7.3.1 -> 7.4.2
2019-04-24 22:40:17 +02:00
Daniel Schaefer bac4d95aa2 treewide: Change URLs to HTTPS
Lots of URLs were HTTP redirect to HTTPS. Changed those and checked them
if there's actual content. Inspired by
https://github.com/NixOS/nixpkgs/issues/60004
2019-04-22 10:19:54 +02:00
Mateusz Kowalczyk 575d6a4826
Merge pull request #58417 from andersk/ortools-7.0
or-tools: 6.10 -> 7.0, add Python bindings
2019-04-20 17:39:23 +09:00
Matthew Bauer f475aeaf29
Merge pull request #59535 from matthewbauer/homepage-fixes
treewide: update homepages to https where available
2019-04-15 20:47:30 -04:00
Matthew Bauer 290a5d916e treewide: update homepages to https where available
Based on "problems" from repology:

https://repology.org/repository/nix_unstable/problems

Mostly simple changes to reflect redirects.
2019-04-15 10:10:05 -04:00
Dmitry Kalinkin 59c81160e7
Merge pull request #58504 from symphorien/static-proot
Static proot, wafHook cross compilation
2019-04-13 12:04:32 -04:00
Matthew Bauer a79a8f29bc waf: use wafConfigureFlags for waf flags
This avoids the potential conflict between autoconf flags and the waf
flags. There is some overlap between the two but waf errors when it
doesn’t recognize the flag.
2019-04-09 23:44:37 -04:00
Frederik Rietdijk d108b49168 Merge master into staging-next 2019-04-09 16:38:35 +02:00
Vladimír Čunát e1f55599cc
Merge #58589: openblas: fix aarch64 build 2019-04-07 16:58:42 +02:00
Jan Tojnar cb1a20499a
Merge branch 'master' into staging 2019-04-05 11:37:15 +02:00
Markus Kowalewski 70867a92f6
arpack: fix tests on darwin 2019-04-03 10:48:52 +02:00
Markus Kowalewski 9a60a65249
arpack: 3.6.3 -> 3.7.0
* switch to FetchFromGitHub
* switch from autotools to cmake
* add eigen to input (is now required)
2019-04-03 10:48:52 +02:00
Markus Kowalewski 734c6c21cb
mkl: 2019.0.117 -> 2019.3.199 2019-04-01 21:50:23 +02:00
Markus Kowalewski fa28a838f3
openblas: fix aarch64 build 2019-03-31 12:19:41 +02:00
Markus Kowalewski 4c74ee948e
clblas: turn of gtest, fix build
clblas does not work anymore with gmock 1.8.1.
Turning off the test suite fixes the build.
2019-03-29 13:59:45 +01:00
sveitser e29e315c5f
cudnn_cudatoolkit_10: 7.3.1 -> 7.4.2 2019-03-28 21:49:13 +08:00
Anders Kaseorg ae6b9dcb0e or-tools: 6.10 -> 7.0
Signed-off-by: Anders Kaseorg <andersk@mit.edu>
2019-03-26 17:04:03 -07:00
Anders Kaseorg 08e9273e29 or-tools: Add Python bindings
Signed-off-by: Anders Kaseorg <andersk@mit.edu>
2019-03-26 17:04:03 -07:00
Wael M. Nasreddine 5af0780492
Merge remote-tracking branch 'origin/master' into staging
* origin/master: (693 commits)
  buildGoModule: use go_1_12 instead of go_1_11 (#58103)
  gitAndTools.lab: 0.15.2 -> 0.15.3 (#58091)
  signal-desktop: 1.22.0 -> 1.23.0
  added missing semicolon to documentation
  terminus_font_ttf: 4.46.0 -> 4.47.0
  buildGoModule: remove SSL env vars in favor of cacert in buildInputs (#58071)
  dav1d: init at 0.2.1
  dropbox-cli: 2018.11.28 -> 2019.02.14
  atlassian-confluence: 6.14.1 -> 6.14.2
  maintainers: update email for dywedir
  python.pkgs.hglib: use patch to specify hg path (#57926)
  chkrootkit: 0.52 -> 0.53
  radare2-cutter: 1.7.2 -> 1.8.0
  autorandr: 1.7 -> 1.8
  pythonPackages.pyhepmc: fix build
  llvm-polly/clang-polly: use latest llvm
  apulse: 0.1.11.1 -> 0.1.12, cleanup
  factorio: experimental 0.17.14 → 0.17.16 (#58000)
  sequeler: 0.6.7 -> 0.6.8
  nasc: 0.5.1 -> 0.5.2
  ...
2019-03-21 21:01:25 -07:00
R. RyanTM e14d70d955 primesieve: 7.3 -> 7.4 (#57375)
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/primesieve/versions
2019-03-12 22:43:56 +01:00
Matthew Bauer 37eba81c7b
Merge pull request #56391 from matthewbauer/cmake-treewide
Add more CMake flags
2019-03-11 12:43:46 -04:00
Matthew Bauer 6ed49262f5 treewide: remove BUILD_TESTING flag
This is now set by CMake
2019-03-11 10:11:28 -04:00
R. RyanTM cac06fc53d ipopt: 3.12.11 -> 3.12.12
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/ipopt/versions
2019-03-03 20:47:42 +01:00
Averell Dalton d7806fe4ed openblas: adjust makeFlags handling 2019-02-23 09:13:57 +01:00
Markus Kowalewski dbf5135385
scalapack: update meta data
* Set platform from linux -> x86_64-linux
  Scalapack does not seem to run properly on ARM (failing tests)

* Add markuskowa as maintainer
2019-02-21 15:08:33 +01:00
Markus Kowalewski 4aa90ac089
scalapack: add openmpi4 compatibility patch 2019-02-21 15:08:32 +01:00
Will Dietz 32322da1a6 openblas: fix config breakage introduced for configs using 'false'
My earlier change mistakenly expected `toString false` to produce '0'
instead of the empty string, leading to unexpected config changes.

Intended to address issue mentioned here and in following discussion:

https://github.com/NixOS/nixpkgs/pull/53972#issuecomment-459981602

Sorry, folks!

(special-case handling of bools here makes this "cleanup" a bit
 less of an obvious win but hopefully still preferable overall :))

-----------

makeFlags in resulting derivation, according to this one-liner:

$ nix show-derivation -f . openblas|jq ".[].env.makeFlags"

before:
"BINARY=64 CC=cc CROSS= DYNAMIC_ARCH=1 FC=gfortran HOSTCC=cc INTERFACE64=1 NO_BINARY_MODE= NO_STATIC=1 NUM_THREADS=64 PREFIX=/1rz4g4znpzjwh1xymhjpm42vipw92pr73vdgl6xs1hycac8kf2n9 TARGET=ATHLON USE_OPENMP=1"

after:
"BINARY=64 CC=cc CROSS=0 DYNAMIC_ARCH=1 FC=gfortran HOSTCC=cc INTERFACE64=1 NO_BINARY_MODE=0 NO_STATIC=1 NUM_THREADS=64 PREFIX=/1rz4g4znpzjwh1xymhjpm42vipw92pr73vdgl6xs1hycac8kf2n9 TARGET=ATHLON USE_OPENMP=1"

Without knowing how `placeholder` works, it seems interesting if
entirely unrelated that the `PREFIX` is same for both! :). TIL.
2019-02-17 19:51:55 +01:00
Dylan Simon e69fdc1715 sympow: fix patch url to working revision (#55778)
fix_pointer_initialization2.patch no longer exists on trunk -- download
from a fixed older revision where it did.
2019-02-14 21:10:37 +01:00
Matthew Bauer 2433c575f0 openblas: fix on linux
This reverse changes made cfc4313 which broke builds on linux. Still
not sure why this broke Linux, but we can investigate it later.
“buildPackages.stdenv.cc” shouldn’t be put in nativeBuildInputs in
general. Either way, this restores hashes to before that commit.

thanks to @jethrokuan
2019-02-10 20:16:16 -05:00
Matthew Bauer cfc43138cb openblas: fix on darwin
The openblas script relies on CC=clang for succesfully compiling on
Darwin systems. This seems like bad behavior, but we get things like
https://hydra.nixos.org/build/87657058 otherwise.

Fixes #55536.
2019-02-10 18:49:04 -05:00
Vladimír Čunát c40f211499
Merge branch 'staging-next'
It's not completely without regressions, but ATM it seems to bring more
upsides than downsides and the iteration is too long already.
2019-02-10 14:20:49 +01:00
Orivej Desh 59cd3ee895 nccl: 2.1.4 -> 2.4.2-1 (#55292) 2019-02-10 01:20:04 +00:00
Vladimír Čunát ff101946a8
Merge branch 'master' into staging-next
Hydra nixpkgs: ?compare=1503899
2019-02-06 14:24:46 +01:00
Guillaume Bouchard 9f0ee6c606 primesieve: init at 7.3 2019-02-04 13:03:50 +01:00
Vladimír Čunát 5effa4e0f9
Merge branch 'master' into staging-next
Comments on conflicts:
- llvm: d6f401e1 vs. 469ecc70 - docs for 6 and 7 say the default is
  to build all targets, so we should be fine
- some pypi hashes: they were equivalent, just base16 vs. base32
2019-02-01 09:22:29 +01:00
Markus Kowalewski 57c37456db
openblas: make the optimazation target overridable 2019-01-29 14:34:02 +01:00
Will Dietz 1f0467005d openblas: 0.3.4 -> 0.3.5, rework a bit (#53972)
* openblas: simplify a bit, fix doCheck so tests are enabled non-cross.

* doCheck should be 'true' in (at least) the non-cross case,
  this looks like an inverted check that's largely benign
* doCheck will be set to 'false' in the cross case anyway,
  makeDerivation does this IIRC
* targetPrefix can be used without checking, probably by design

Derivation hash does change but no "real" functionality change intended.

* openblas: nix types for config attrs (hash-preserving)

* openblas: more nix-ification, merge in cross attrs, prefer to always set

(but set appropriately for cross and non-cross cases both)

* I'm not sure what NO_BINARY_MODE does,
  this change now sets explicitly false in the non-cross scenario
  (previously unset unless cross).
* Drop musl NO_AFFINITY case, will be removed in upgrade shortly

* openblas: 0.3.4 -> 0.3.5
2019-01-15 16:36:07 +01:00
Frederik Rietdijk 05ee1015bb openblas: fix cross-compilation 2019-01-15 10:11:33 +01:00
Timo Kaufmann 04ba895ecd
suitesparse: 5.3.0 -> 5.4.0 (#53128) 2019-01-01 15:47:55 +01:00
Silvan Mosberger eb864397a0
Merge pull request #52508 from tkonolige/fix_suitesparse_darwin
suitesparse: Fix darwin support
2018-12-31 03:24:48 +01:00
agracie a3fc481b76 mkl: fix hash on Darwin 2018-12-26 20:57:08 -05:00
Bas van Dijk 72eae72223 openblas: fix build on x86_64-darwin
See: https://github.com/xianyi/OpenBLAS/issues/1926
2018-12-20 13:25:44 +01:00
Benjamin Hipple 6206a342e0 mkl: include Intel's libiomp.so in the MKL RPM unpack
Since Intel's default openmp implementation is available in the same src
tarball, we can just include it in the package. This means that `mkl` now "just
works" without any environment variables, fragile setup-hooks, or forced
propagation.

Since the openmp implementation is only needed at runtime (and for test cases),
users can substitute a different one if they prefer by exporting it with
`LD_PRELOAD`, which is how Intel recommends handling this. If they do not do so,
`libiomp.so` lives next to `libmkl_rt.so` and thus will be in the RPATH as a
sane default.

Since this still comes from the same src tarball, we can ship it without losing
the fixed-output derivation; likewise, since Hydra is not building or caching
these, shipping these proprietary packages costs no bandwidth for the nix
community.
2018-12-19 22:05:22 +01:00
Tristan Konolige 00005ce0bd suitesparse: Fix darwin support
Suitesparse libraries would end up containing references to the build
directory. fixDarwinDylibNames appears to not fix this problem. We
manually use intall_name_tool to set the library paths correctly.
2018-12-18 18:08:17 -07:00
Frederik Rietdijk 4deb04a97a openblas: 0.3.3 -> 0.3.4 2018-12-07 15:21:25 +01:00