{ stdenv, fetchurl, zlib, bzip2, lzma, curl, perl }: stdenv.mkDerivation rec { name = "${pname}-${version}"; version = "${major}.0"; pname = "htslib"; major = "1.6"; src = fetchurl { url = "https://github.com/samtools/htslib/releases/download/${major}/htslib-${major}.tar.bz2"; sha256 = "1jsca3hg4rbr6iqq6imkj4lsvgl8g9768bcmny3hlff2w25vx24m"; }; propagatedNativeBuildInputs = [ perl ]; buildInputs = [ zlib bzip2 lzma curl ]; configureFlags = "--enable-libcurl"; # optional but strongly recommended installFlags = "prefix=$(out)"; enableParallelBuilding = true; doCheck = true; preCheck = '' find test -name "*.pl" -exec sed -ie 's|/usr/bin/\(env[[:space:]]\)\{0,1\}perl|${perl}/bin/perl|' {} + ''; meta = with stdenv.lib; { description = "A C library for reading/writing high-throughput sequencing data"; license = licenses.mit; homepage = http://www.htslib.org/; platforms = platforms.unix; maintainers = [ maintainers.mimadrid ]; }; }