{lib, stdenv, fetchFromGitHub, zlib, python3, bzip2, xz}: stdenv.mkDerivation rec { pname = "bedtools"; version = "2.30.0"; src = fetchFromGitHub { owner = "arq5x"; repo = "bedtools2"; rev = "v${version}"; sha256 = "sha256-NqKldF7ePJn3pT+AkESIQghBKSFFOEBBsTaKEbU+oaQ="; }; strictDeps = true; nativeBuildInputs = [ python3 ]; buildInputs = [ zlib bzip2 xz ]; cxx = if stdenv.cc.isClang then "clang++" else "g++"; cc = if stdenv.cc.isClang then "clang" else "gcc"; buildPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} -j $NIX_BUILD_CORES"; installPhase = "make prefix=$out SHELL=${stdenv.shell} CXX=${cxx} CC=${cc} install"; meta = with lib; { description = "A powerful toolset for genome arithmetic"; license = licenses.gpl2; homepage = "https://bedtools.readthedocs.io/en/latest/"; maintainers = with maintainers; [ jbedo ]; platforms = platforms.unix; }; }