nixpkgs/pkgs/development/r-modules/generate-cran-packages.R
Adam Vogt 8365753a43 let generate-cran-packages.R read checksums from cran-packages.nix
this lets "Rscript generate-cran-packages.R > cran-packages.nix"
complete much quicker, because we only have to download packages
with new versions.
2015-02-25 17:43:43 -05:00

49 lines
2.3 KiB
R

library(data.table)
library(parallel)
cl <- makeCluster(10)
options(repos=structure(c(CRAN="http://cran.rstudio.com/")))
readFormatted <- as.data.table(read.table(skip=6, sep='"', text=head(readLines('cran-packages.nix'), -1)))
nixPrefetch <- function(name, version) {
prevV <- readFormatted$V2 == name & readFormatted$V4 == version
if (sum(prevV) == 1) as.character(readFormatted$V6[ prevV ]) else
system(paste0("nix-prefetch-url --type sha256 http://cran.rstudio.com/src/contrib/", name, "_", version, ".tar.gz"), intern=TRUE)
# system(paste0("nix-hash --flat --base32 --type sha256 /nix/store/*", name, "_", version, ".tar.gz", "| head -n 1"), intern=TRUE)
}
formatPackage <- function(name, version, sha256, depends, imports, linkingTo, knownPackages) {
attr <- gsub(".", "_", name, fixed=TRUE)
if (is.na(depends)) depends <- "";
depends <- unlist(strsplit(depends, split="[ \t\n]*,[ \t\n]*", fixed=FALSE))
depends <- c(depends, unlist(strsplit(imports, split="[ \t\n]*,[ \t\n]*", fixed=FALSE)))
depends <- c(depends, unlist(strsplit(linkingTo, split="[ \t\n]*,[ \t\n]*", fixed=FALSE)))
depends <- sapply(depends, gsub, pattern="([^ \t\n(]+).*", replacement="\\1")
depends <- depends[depends %in% knownPackages]
depends <- sapply(depends, gsub, pattern=".", replacement="_", fixed=TRUE)
depends <- paste(depends, collapse=" ")
paste0(attr, " = derive { name=\"", name, "\"; version=\"", version, "\"; sha256=\"", sha256, "\"; depends=[", depends, "]; };")
}
clusterExport(cl, c("nixPrefetch","readFormatted"))
pkgs <- as.data.table(available.packages(filters=c("R_version", "OS_type", "CRAN", "duplicates")))
pkgs <- subset(pkgs, Repository=="http://cran.rstudio.com/src/contrib")
pkgs <- pkgs[order(Package)]
pkgs$sha256 <- parApply(cl, pkgs, 1, function(p) nixPrefetch(p[1], p[2]))
knownPackages <- unique(pkgs$Package)
nix <- apply(pkgs, 1, function(p) formatPackage(p[1], p[2], p[18], p[4], p[5], p[6], knownPackages))
cat("# This file is generated from generate-cran-packages.R. DO NOT EDIT.\n")
cat("# Execute the following command to update the file.\n")
cat("#\n")
cat("# Rscript generate-cran-packages.R > cran-packages.nix\n")
cat("\n")
cat("{ self, derive }: with self; {\n")
cat(paste(nix, collapse="\n"), "\n")
cat("}\n")
stopCluster(cl)