nixpkgs/pkgs/development/tools/poetry2nix/poetry2nix/overrides.nix
markuskowa 2f34b4b883
Merge pull request #108983 from markuskowa/dev-mpi
Use mpi attribute consistently to provide a default MPI implementation
2021-01-23 22:51:09 +01:00

1321 lines
35 KiB
Nix

{ pkgs ? import <nixpkgs> { }
, lib ? pkgs.lib
, stdenv ? pkgs.stdenv
}:
self: super:
{
automat = super.automat.overridePythonAttrs (
old: rec {
propagatedBuildInputs = old.propagatedBuildInputs ++ [ self.m2r ];
}
);
ansible = super.ansible.overridePythonAttrs (
old: {
prePatch = pkgs.python.pkgs.ansible.prePatch or "";
postInstall = pkgs.python.pkgs.ansible.postInstall or "";
# Inputs copied from nixpkgs as ansible doesn't specify it's dependencies
# in a correct manner.
propagatedBuildInputs = old.propagatedBuildInputs ++ [
self.pycrypto
self.paramiko
self.jinja2
self.pyyaml
self.httplib2
self.six
self.netaddr
self.dnspython
self.jmespath
self.dopy
self.ncclient
];
}
);
ansible-lint = super.ansible-lint.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.setuptools-scm-git-archive ];
preBuild = ''
export HOME=$(mktemp -d)
'';
}
);
astroid = super.astroid.overridePythonAttrs (
old: rec {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
doCheck = false;
}
);
av = super.av.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [
pkgs.pkg-config
];
buildInputs = old.buildInputs ++ [ pkgs.ffmpeg_4 ];
}
);
bcrypt = super.bcrypt.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ pkgs.libffi ];
}
);
cairocffi = super.cairocffi.overridePythonAttrs (
old: {
inherit (pkgs.python3.pkgs.cairocffi) patches;
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
cairosvg = super.cairosvg.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
cssselect2 = super.cssselect2.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
cffi =
# cffi is bundled with pypy
if self.python.implementation == "pypy" then null else
(
super.cffi.overridePythonAttrs (
old: {
buildInputs = old.buildInputs or [ ] ++ [ pkgs.libffi ];
}
)
);
cftime = super.cftime.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
self.cython
];
}
);
colour = super.colour.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.d2to1 ];
}
);
configparser = super.configparser.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
self.toml
];
postPatch = ''
substituteInPlace setup.py --replace 'setuptools.setup()' 'setuptools.setup(version="${old.version}")'
'';
}
);
cryptography = super.cryptography.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs or [ ]
++ lib.optional (stdenv.buildPlatform != stdenv.hostPlatform) self.python.pythonForBuild.pkgs.cffi;
buildInputs = old.buildInputs ++ [ pkgs.openssl ];
}
);
dictdiffer = super.dictdiffer.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
propagatedBuildInputs = old.propagatedBuildInputs ++ [ self.setuptools ];
}
);
django = (
super.django.overridePythonAttrs (
old: {
propagatedNativeBuildInputs = (old.propagatedNativeBuildInputs or [ ])
++ [ pkgs.gettext ];
}
)
);
django-bakery = super.django-bakery.overridePythonAttrs (
old: {
configurePhase = ''
if ! test -e LICENSE; then
touch LICENSE
fi
'' + (old.configurePhase or "");
}
);
dlib = super.dlib.overridePythonAttrs (
old: {
# Parallel building enabled
inherit (pkgs.python.pkgs.dlib) patches;
enableParallelBuilding = true;
dontUseCmakeConfigure = true;
nativeBuildInputs = old.nativeBuildInputs ++ pkgs.dlib.nativeBuildInputs;
buildInputs = old.buildInputs ++ pkgs.dlib.buildInputs;
}
);
# Environment markers are not always included (depending on how a dep was defined)
enum34 = if self.pythonAtLeast "3.4" then null else super.enum34;
eth-hash = super.eth-hash.overridePythonAttrs {
preConfigure = ''
substituteInPlace setup.py --replace \'setuptools-markdown\' ""
'';
};
eth-keyfile = super.eth-keyfile.overridePythonAttrs {
preConfigure = ''
substituteInPlace setup.py --replace \'setuptools-markdown\' ""
'';
};
eth-keys = super.eth-keys.overridePythonAttrs {
preConfigure = ''
substituteInPlace setup.py --replace \'setuptools-markdown\' ""
'';
};
faker = super.faker.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
doCheck = false;
}
);
fancycompleter = super.fancycompleter.overridePythonAttrs (
old: {
postPatch = ''
substituteInPlace setup.py \
--replace 'setup_requires="setupmeta"' 'setup_requires=[]' \
--replace 'versioning="devcommit"' 'version="${old.version}"'
'';
}
);
fastparquet = super.fastparquet.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
grandalf = super.grandalf.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
doCheck = false;
}
);
h3 = super.h3.overridePythonAttrs (
old: {
preBuild = (old.preBuild or "") + ''
substituteInPlace h3/h3.py \
--replace "'{}/{}'.format(_dirname, libh3_path)" '"${pkgs.h3}/lib/libh3${pkgs.stdenv.hostPlatform.extensions.sharedLibrary}"'
'';
}
);
h5py = super.h5py.overridePythonAttrs (
old:
if old.format != "wheel" then rec {
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.pkg-config ];
buildInputs = old.buildInputs ++ [ pkgs.hdf5 self.pkg-config self.cython ];
configure_flags = "--hdf5=${pkgs.hdf5}";
postConfigure = ''
${self.python.executable} setup.py configure ${configure_flags}
'';
} else old
);
horovod = super.horovod.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [ pkgs.mpi ];
}
);
imagecodecs = super.imagecodecs.overridePythonAttrs (
old: {
patchPhase = ''
substituteInPlace setup.py \
--replace "/usr/include/openjpeg-2.3" \
"${pkgs.openjpeg.dev}/include/openjpeg-2.3"
substituteInPlace setup.py \
--replace "/usr/include/jxrlib" \
"$out/include/libjxr"
substituteInPlace imagecodecs/_zopfli.c \
--replace '"zopfli/zopfli.h"' \
'<zopfli.h>'
substituteInPlace imagecodecs/_zopfli.c \
--replace '"zopfli/zlib_container.h"' \
'<zlib_container.h>'
substituteInPlace imagecodecs/_zopfli.c \
--replace '"zopfli/gzip_container.h"' \
'<gzip_container.h>'
'';
preBuild = ''
mkdir -p $out/include/libjxr
ln -s ${pkgs.jxrlib}/include/libjxr/**/* $out/include/libjxr
'';
buildInputs = old.buildInputs ++ [
# Commented out packages are declared required, but not actually
# needed to build. They are not yet packaged for nixpkgs.
# bitshuffle
pkgs.brotli
# brunsli
pkgs.bzip2
pkgs.c-blosc
# charls
pkgs.giflib
pkgs.jxrlib
pkgs.lcms
pkgs.libaec
pkgs.libaec
pkgs.libjpeg_turbo
# liblzf
# liblzma
pkgs.libpng
pkgs.libtiff
pkgs.libwebp
pkgs.lz4
pkgs.openjpeg
pkgs.snappy
# zfp
pkgs.zopfli
pkgs.zstd
pkgs.zlib
];
}
);
# importlib-metadata has an incomplete dependency specification
importlib-metadata = super.importlib-metadata.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ lib.optional self.python.isPy2 self.pathlib2;
}
);
intreehooks = super.intreehooks.overridePythonAttrs (
old: {
doCheck = false;
}
);
isort = super.isort.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [ self.setuptools ];
}
);
# disable the removal of pyproject.toml, required because of setuptools_scm
jaraco-functools = super.jaraco-functools.overridePythonAttrs (
old: {
dontPreferSetupPy = true;
}
);
jira = super.jira.overridePythonAttrs (
old: {
inherit (pkgs.python3Packages.jira) patches;
buildInputs = old.buildInputs ++ [
self.pytestrunner
self.cryptography
self.pyjwt
];
}
);
jsonpickle = super.jsonpickle.overridePythonAttrs (
old: {
dontPreferSetupPy = true;
}
);
jupyter = super.jupyter.overridePythonAttrs (
old: rec {
# jupyter is a meta-package. Everything relevant comes from the
# dependencies. It does however have a jupyter.py file that conflicts
# with jupyter-core so this meta solves this conflict.
meta.priority = 100;
}
);
keyring = super.keyring.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
self.toml
];
postPatch = ''
substituteInPlace setup.py --replace 'setuptools.setup()' 'setuptools.setup(version="${old.version}")'
'';
}
);
kiwisolver = super.kiwisolver.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
self.cppy
];
}
);
lap = super.lap.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [
self.numpy
];
}
);
libvirt-python = super.libvirt-python.overridePythonAttrs ({ nativeBuildInputs ? [ ], ... }: {
nativeBuildInputs = nativeBuildInputs ++ [ pkgs.pkg-config ];
propagatedBuildInputs = [ pkgs.libvirt ];
});
llvmlite = super.llvmlite.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.llvm ];
# Disable static linking
# https://github.com/numba/llvmlite/issues/93
postPatch = ''
substituteInPlace ffi/Makefile.linux --replace "-static-libstdc++" ""
substituteInPlace llvmlite/tests/test_binding.py --replace "test_linux" "nope"
'';
# Set directory containing llvm-config binary
preConfigure = ''
export LLVM_CONFIG=${pkgs.llvm}/bin/llvm-config
'';
__impureHostDeps = pkgs.lib.optionals pkgs.stdenv.isDarwin [ "/usr/lib/libm.dylib" ];
passthru = old.passthru // { llvm = pkgs.llvm; };
}
);
lockfile = super.lockfile.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [ self.pbr ];
}
);
lxml = super.lxml.overridePythonAttrs (
old: {
nativeBuildInputs = with pkgs; old.nativeBuildInputs ++ [ pkg-config libxml2.dev libxslt.dev ];
buildInputs = with pkgs; old.buildInputs ++ [ libxml2 libxslt ];
}
);
markupsafe = super.markupsafe.overridePythonAttrs (
old: {
src = old.src.override { pname = builtins.replaceStrings [ "markupsafe" ] [ "MarkupSafe" ] old.pname; };
}
);
matplotlib = super.matplotlib.overridePythonAttrs (
old:
let
enableGhostscript = old.passthru.enableGhostscript or false;
enableGtk3 = old.passthru.enableTk or false;
enableQt = old.passthru.enableQt or false;
enableTk = old.passthru.enableTk or false;
inherit (pkgs.darwin.apple_sdk.frameworks) Cocoa;
in
{
NIX_CFLAGS_COMPILE = lib.optionalString stdenv.isDarwin "-I${pkgs.libcxx}/include/c++/v1";
XDG_RUNTIME_DIR = "/tmp";
buildInputs = old.buildInputs
++ lib.optional enableGhostscript pkgs.ghostscript
++ lib.optional stdenv.isDarwin [ Cocoa ];
nativeBuildInputs = old.nativeBuildInputs ++ [
pkgs.pkg-config
];
postPatch = ''
cat > setup.cfg <<EOF
[libs]
system_freetype = True
EOF
'';
propagatedBuildInputs = old.propagatedBuildInputs ++ [
pkgs.libpng
pkgs.freetype
]
++ lib.optionals enableGtk3 [ pkgs.cairo self.pycairo pkgs.gtk3 pkgs.gobject-introspection self.pygobject3 ]
++ lib.optionals enableTk [ pkgs.tcl pkgs.tk self.tkinter pkgs.libX11 ]
++ lib.optionals enableQt [ self.pyqt5 ]
;
inherit (super.matplotlib) patches;
}
);
# Calls Cargo at build time for source builds and is really tricky to package
maturin = super.maturin.override {
preferWheel = true;
};
mccabe = super.mccabe.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
doCheck = false;
}
);
mip = super.mip.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.autoPatchelfHook ];
buildInputs = old.buildInputs ++ [ pkgs.zlib self.cppy ];
}
);
molecule =
if lib.versionOlder super.molecule.version "3.0.0" then
(super.molecule.overridePythonAttrs (
old: {
patches = (old.patches or [ ]) ++ [
# Fix build with more recent setuptools versions
(pkgs.fetchpatch {
url = "https://github.com/ansible-community/molecule/commit/c9fee498646a702c77b5aecf6497cff324acd056.patch";
sha256 = "1g1n45izdz0a3c9akgxx14zhdw6c3dkb48j8pq64n82fa6ndl1b7";
excludes = [ "pyproject.toml" ];
})
];
buildInputs = old.buildInputs ++ [ self.setuptools-scm-git-archive ];
}
)) else
super.molecule.overridePythonAttrs (old: {
buildInputs = old.buildInputs ++ [ self.setuptools-scm-git-archive ];
});
mongomock = super.mongomock.overridePythonAttrs (oa: {
buildInputs = oa.buildInputs ++ [ self.pbr ];
});
mpi4py = super.mpi4py.overridePythonAttrs (
old:
let
cfg = pkgs.writeTextFile {
name = "mpi.cfg";
text = (
lib.generators.toINI
{ }
{
mpi = {
mpicc = "${pkgs.mpi.outPath}/bin/mpicc";
};
}
);
};
in
{
propagatedBuildInputs = old.propagatedBuildInputs ++ [ pkgs.mpi ];
enableParallelBuilding = true;
preBuild = ''
ln -sf ${cfg} mpi.cfg
'';
}
);
multiaddr = super.multiaddr.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
netcdf4 = super.netcdf4.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
self.cython
];
propagatedBuildInputs = old.propagatedBuildInputs ++ [
pkgs.zlib
pkgs.netcdf
pkgs.hdf5
pkgs.curl
pkgs.libjpeg
];
# Variables used to configure the build process
USE_NCCONFIG = "0";
HDF5_DIR = lib.getDev pkgs.hdf5;
NETCDF4_DIR = pkgs.netcdf;
CURL_DIR = pkgs.curl.dev;
JPEG_DIR = pkgs.libjpeg.dev;
}
);
numpy = super.numpy.overridePythonAttrs (
old:
let
blas = old.passthru.args.blas or pkgs.openblasCompat;
blasImplementation = lib.nameFromURL blas.name "-";
cfg = pkgs.writeTextFile {
name = "site.cfg";
text = (
lib.generators.toINI
{ }
{
${blasImplementation} = {
include_dirs = "${blas}/include";
library_dirs = "${blas}/lib";
} // lib.optionalAttrs (blasImplementation == "mkl") {
mkl_libs = "mkl_rt";
lapack_libs = "";
};
}
);
};
in
{
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.gfortran ];
buildInputs = old.buildInputs ++ [ blas self.cython ];
enableParallelBuilding = true;
preBuild = ''
ln -s ${cfg} site.cfg
'';
passthru = old.passthru // {
blas = blas;
inherit blasImplementation cfg;
};
}
);
openexr = super.openexr.overridePythonAttrs (
old: rec {
buildInputs = old.buildInputs ++ [ pkgs.openexr pkgs.ilmbase ];
NIX_CFLAGS_COMPILE = [ "-I${pkgs.openexr.dev}/include/OpenEXR" "-I${pkgs.ilmbase.dev}/include/OpenEXR" ];
}
);
parsel = super.parsel.overridePythonAttrs (
old: rec {
nativeBuildInputs = old.nativeBuildInputs ++ [ self.pytest-runner ];
}
);
peewee = super.peewee.overridePythonAttrs (
old:
let
withPostgres = old.passthru.withPostgres or false;
withMysql = old.passthru.withMysql or false;
in
{
buildInputs = old.buildInputs or [ ] ++ [ pkgs.sqlite ];
propagatedBuildInputs = old.propagatedBuildInputs or [ ]
++ lib.optional withPostgres self.psycopg2
++ lib.optional withMysql self.mysql-connector;
}
);
pillow = super.pillow.overridePythonAttrs (
old: {
nativeBuildInputs = [ pkgs.pkg-config ] ++ old.nativeBuildInputs;
buildInputs = with pkgs; [ freetype libjpeg zlib libtiff libwebp tcl lcms2 ] ++ old.buildInputs;
}
);
poetry-core = super.poetry-core.overridePythonAttrs (old: {
# "Vendor" dependencies (for build-system support)
postPatch = ''
echo "import sys" >> poetry/__init__.py
for path in $propagatedBuildInputs; do
echo "sys.path.insert(0, \"$path\")" >> poetry/__init__.py
done
'';
# Propagating dependencies leads to issues downstream
# We've already patched poetry to prefer "vendored" dependencies
postFixup = ''
rm $out/nix-support/propagated-build-inputs
'';
});
# disable the removal of pyproject.toml, required because of setuptools_scm
portend = super.portend.overridePythonAttrs (
old: {
dontPreferSetupPy = true;
}
);
psycopg2 = super.psycopg2.overridePythonAttrs (
old: {
buildInputs = old.buildInputs
++ lib.optional stdenv.isDarwin pkgs.openssl;
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.postgresql ];
}
);
psycopg2-binary = super.psycopg2-binary.overridePythonAttrs (
old: {
buildInputs = old.buildInputs
++ lib.optional stdenv.isDarwin pkgs.openssl;
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.postgresql ];
}
);
pyarrow =
if lib.versionAtLeast super.pyarrow.version "0.16.0" then
super.pyarrow.overridePythonAttrs
(
old:
let
parseMinor = drv: lib.concatStringsSep "." (lib.take 2 (lib.splitVersion drv.version));
# Starting with nixpkgs revision f149c7030a7, pyarrow takes "python3" as an argument
# instead of "python". Below we inspect function arguments to maintain compatibilitiy.
_arrow-cpp = pkgs.arrow-cpp.override (
builtins.intersectAttrs
(lib.functionArgs pkgs.arrow-cpp.override)
{ python = self.python; python3 = self.python; }
);
ARROW_HOME = _arrow-cpp;
arrowCppVersion = parseMinor pkgs.arrow-cpp;
pyArrowVersion = parseMinor super.pyarrow;
errorMessage = "arrow-cpp version (${arrowCppVersion}) mismatches pyarrow version (${pyArrowVersion})";
in
if arrowCppVersion != pyArrowVersion then throw errorMessage else {
nativeBuildInputs = old.nativeBuildInputs ++ [
self.cython
pkgs.pkg-config
pkgs.cmake
];
preBuild = ''
export PYARROW_PARALLEL=$NIX_BUILD_CORES
'';
PARQUET_HOME = _arrow-cpp;
inherit ARROW_HOME;
buildInputs = old.buildInputs ++ [
pkgs.arrow-cpp
];
PYARROW_BUILD_TYPE = "release";
PYARROW_WITH_PARQUET = true;
PYARROW_CMAKE_OPTIONS = [
"-DCMAKE_INSTALL_RPATH=${ARROW_HOME}/lib"
# This doesn't use setup hook to call cmake so we need to workaround #54606
# ourselves
"-DCMAKE_POLICY_DEFAULT_CMP0025=NEW"
];
dontUseCmakeConfigure = true;
}
) else
super.pyarrow.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [
self.cython
];
}
);
pycairo = (
drv: (
drv.overridePythonAttrs (
_: {
format = "other";
}
)
).overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [
pkgs.meson
pkgs.ninja
pkgs.pkg-config
];
propagatedBuildInputs = old.propagatedBuildInputs ++ [
pkgs.cairo
pkgs.xlibsWrapper
];
mesonFlags = [ "-Dpython=${if self.isPy3k then "python3" else "python"}" ];
}
)
)
super.pycairo;
pycocotools = super.pycocotools.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
self.cython
self.numpy
];
}
);
pygame = super.pygame.overridePythonAttrs (
old: rec {
nativeBuildInputs = [
pkgs.pkg-config
pkgs.SDL
];
buildInputs = [
pkgs.SDL
pkgs.SDL_image
pkgs.SDL_mixer
pkgs.SDL_ttf
pkgs.libpng
pkgs.libjpeg
pkgs.portmidi
pkgs.xorg.libX11
pkgs.freetype
];
# Tests fail because of no audio device and display.
doCheck = false;
preConfigure = ''
sed \
-e "s/origincdirs = .*/origincdirs = []/" \
-e "s/origlibdirs = .*/origlibdirs = []/" \
-e "/'\/lib\/i386-linux-gnu', '\/lib\/x86_64-linux-gnu']/d" \
-e "/\/include\/smpeg/d" \
-i buildconfig/config_unix.py
${lib.concatMapStrings
(dep: ''
sed \
-e "/origincdirs =/a\ origincdirs += ['${lib.getDev dep}/include']" \
-e "/origlibdirs =/a\ origlibdirs += ['${lib.getLib dep}/lib']" \
-i buildconfig/config_unix.py
'')
buildInputs
}
LOCALBASE=/ ${self.python.interpreter} buildconfig/config.py
'';
}
);
pygobject = super.pygobject.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.pkg-config ];
buildInputs = old.buildInputs ++ [ pkgs.glib pkgs.gobject-introspection ];
}
);
pylint = super.pylint.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
doCheck = false;
}
);
pyopenssl = super.pyopenssl.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ pkgs.openssl ];
}
);
python-bugzilla = super.python-bugzilla.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [
self.docutils
];
}
);
python-ldap = super.python-ldap.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ pkgs.openldap pkgs.cyrus_sasl ];
}
);
pytoml = super.pytoml.overridePythonAttrs (
old: {
doCheck = false;
}
);
pyqt5 =
let
drv = super.pyqt5;
withConnectivity = drv.passthru.args.withConnectivity or false;
withMultimedia = drv.passthru.args.withMultimedia or false;
withWebKit = drv.passthru.args.withWebKit or false;
withWebSockets = drv.passthru.args.withWebSockets or false;
in
super.pyqt5.overridePythonAttrs (
old: {
format = "other";
nativeBuildInputs = old.nativeBuildInputs ++ [
pkgs.pkg-config
pkgs.qt5.qmake
pkgs.xorg.lndir
pkgs.qt5.qtbase
pkgs.qt5.qtsvg
pkgs.qt5.qtdeclarative
pkgs.qt5.qtwebchannel
# self.pyqt5-sip
self.sip
]
++ lib.optional withConnectivity pkgs.qt5.qtconnectivity
++ lib.optional withMultimedia pkgs.qt5.qtmultimedia
++ lib.optional withWebKit pkgs.qt5.qtwebkit
++ lib.optional withWebSockets pkgs.qt5.qtwebsockets
;
buildInputs = old.buildInputs ++ [
pkgs.dbus
pkgs.qt5.qtbase
pkgs.qt5.qtsvg
pkgs.qt5.qtdeclarative
self.sip
]
++ lib.optional withConnectivity pkgs.qt5.qtconnectivity
++ lib.optional withWebKit pkgs.qt5.qtwebkit
++ lib.optional withWebSockets pkgs.qt5.qtwebsockets
;
# Fix dbus mainloop
patches = pkgs.python3.pkgs.pyqt5.patches or [ ];
configurePhase = ''
runHook preConfigure
export PYTHONPATH=$PYTHONPATH:$out/${self.python.sitePackages}
mkdir -p $out/${self.python.sitePackages}/dbus/mainloop
${self.python.executable} configure.py -w \
--confirm-license \
--no-qml-plugin \
--bindir=$out/bin \
--destdir=$out/${self.python.sitePackages} \
--stubsdir=$out/${self.python.sitePackages}/PyQt5 \
--sipdir=$out/share/sip/PyQt5 \
--designer-plugindir=$out/plugins/designer
runHook postConfigure
'';
postInstall = ''
ln -s ${self.pyqt5-sip}/${self.python.sitePackages}/PyQt5/sip.* $out/${self.python.sitePackages}/PyQt5/
for i in $out/bin/*; do
wrapProgram $i --prefix PYTHONPATH : "$PYTHONPATH"
done
# Let's make it a namespace package
cat << EOF > $out/${self.python.sitePackages}/PyQt5/__init__.py
from pkgutil import extend_path
__path__ = extend_path(__path__, __name__)
EOF
'';
installCheckPhase =
let
modules = [
"PyQt5"
"PyQt5.QtCore"
"PyQt5.QtQml"
"PyQt5.QtWidgets"
"PyQt5.QtGui"
]
++ lib.optional withWebSockets "PyQt5.QtWebSockets"
++ lib.optional withWebKit "PyQt5.QtWebKit"
++ lib.optional withMultimedia "PyQt5.QtMultimedia"
++ lib.optional withConnectivity "PyQt5.QtConnectivity"
;
imports = lib.concatMapStrings (module: "import ${module};") modules;
in
''
echo "Checking whether modules can be imported..."
${self.python.interpreter} -c "${imports}"
'';
doCheck = true;
enableParallelBuilding = true;
}
);
pytest-datadir = super.pytest-datadir.overridePythonAttrs (
old: {
postInstall = ''
rm -f $out/LICENSE
'';
}
);
pytest = super.pytest.overridePythonAttrs (
old: {
doCheck = false;
}
);
pytest-django = super.pytest-django.overridePythonAttrs (
old: {
postPatch = ''
substituteInPlace setup.py --replace "'pytest>=3.6'," ""
substituteInPlace setup.py --replace "'pytest>=3.6'" ""
'';
}
);
pytest-runner = super.pytest-runner or super.pytestrunner;
python-jose = super.python-jose.overridePythonAttrs (
old: {
postPath = ''
substituteInPlace setup.py --replace "'pytest-runner'," ""
substituteInPlace setup.py --replace "'pytest-runner'" ""
'';
}
);
ffmpeg-python = super.ffmpeg-python.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
python-prctl = super.python-prctl.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
pkgs.libcap
];
}
);
pyzmq = super.pyzmq.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.pkg-config ];
propagatedBuildInputs = old.propagatedBuildInputs ++ [ pkgs.zeromq ];
}
);
rockset = super.rockset.overridePythonAttrs (
old: rec {
postPatch = ''
cp ./setup_rockset.py ./setup.py
'';
}
);
scaleapi = super.scaleapi.overridePythonAttrs (
old: {
postPatch = ''
substituteInPlace setup.py --replace "install_requires = ['requests>=2.4.2', 'enum34']" "install_requires = ['requests>=2.4.2']" || true
'';
}
);
pandas = super.pandas.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ self.cython ];
}
);
panel = super.panel.overridePythonAttrs (
old: {
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.nodejs ];
}
);
# Pybind11 is an undeclared dependency of scipy that we need to pick from nixpkgs
# Make it not fail with infinite recursion
pybind11 = super.pybind11.overridePythonAttrs (
old: {
cmakeFlags = (old.cmakeFlags or [ ]) ++ [
"-DPYBIND11_TEST=off"
];
doCheck = false; # Circular test dependency
}
);
rlp = super.rlp.overridePythonAttrs {
preConfigure = ''
substituteInPlace setup.py --replace \'setuptools-markdown\' ""
'';
};
scipy = super.scipy.overridePythonAttrs (
old:
if old.format != "wheel" then {
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.gfortran ];
propagatedBuildInputs = old.propagatedBuildInputs ++ [ self.pybind11 ];
setupPyBuildFlags = [ "--fcompiler='gnu95'" ];
enableParallelBuilding = true;
buildInputs = old.buildInputs ++ [ self.numpy.blas ];
preConfigure = ''
sed -i '0,/from numpy.distutils.core/s//import setuptools;from numpy.distutils.core/' setup.py
export NPY_NUM_BUILD_JOBS=$NIX_BUILD_CORES
'';
preBuild = ''
ln -s ${self.numpy.cfg} site.cfg
'';
} else old
);
scikit-learn = super.scikit-learn.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [
pkgs.gfortran
pkgs.glibcLocales
] ++ lib.optionals stdenv.cc.isClang [
pkgs.llvmPackages.openmp
];
nativeBuildInputs = old.nativeBuildInputs ++ [
self.cython
];
enableParallelBuilding = true;
}
);
shapely = super.shapely.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ pkgs.geos self.cython ];
inherit (pkgs.python3.pkgs.shapely) patches GEOS_LIBRARY_PATH;
}
);
shellingham =
if lib.versionAtLeast super.shellingham.version "1.3.2" then
(
super.shellingham.overridePythonAttrs (
old: {
format = "pyproject";
}
)
) else super.shellingham;
tables = super.tables.overridePythonAttrs (
old: {
HDF5_DIR = "${pkgs.hdf5}";
nativeBuildInputs = old.nativeBuildInputs ++ [ pkgs.pkg-config ];
propagatedBuildInputs = old.nativeBuildInputs ++ [ pkgs.hdf5 self.numpy self.numexpr ];
}
);
# disable the removal of pyproject.toml, required because of setuptools_scm
tempora = super.tempora.overridePythonAttrs (
old: {
dontPreferSetupPy = true;
}
);
tensorflow = super.tensorflow.overridePythonAttrs (
old: {
postInstall = ''
rm $out/bin/tensorboard
'';
}
);
tensorpack = super.tensorpack.overridePythonAttrs (
old: {
postPatch = ''
substituteInPlace setup.cfg --replace "# will call find_packages()" ""
'';
}
);
tinycss2 = super.tinycss2.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
torch = lib.makeOverridable
({ enableCuda ? false
, cudatoolkit ? pkgs.cudatoolkit_10_1
, pkg ? super.torch
}: pkg.overrideAttrs (old:
{
preConfigure =
if (!enableCuda) then ''
export USE_CUDA=0
'' else ''
export LD_LIBRARY_PATH="$LD_LIBRARY_PATH:${cudatoolkit}/targets/x86_64-linux/lib"
'';
preFixup = lib.optionalString (!enableCuda) ''
# For some reason pytorch retains a reference to libcuda even if it
# is explicitly disabled with USE_CUDA=0.
find $out -name "*.so" -exec ${pkgs.patchelf}/bin/patchelf --remove-needed libcuda.so.1 {} \;
'';
buildInputs = old.buildInputs ++ lib.optionals enableCuda [
pkgs.linuxPackages.nvidia_x11
pkgs.nccl.dev
pkgs.nccl.out
];
propagatedBuildInputs = [
super.numpy
super.future
];
})
)
{ };
typeguard = super.typeguard.overridePythonAttrs (old: {
postPatch = ''
substituteInPlace setup.py \
--replace 'setup()' 'setup(version="${old.version}")'
'';
});
# nix uses a dash, poetry uses an underscore
typing_extensions = super.typing_extensions or self.typing-extensions;
urwidtrees = super.urwidtrees.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [
self.urwid
];
}
);
vose-alias-method = super.vose-alias-method.overridePythonAttrs (
old: {
postInstall = ''
rm -f $out/LICENSE
'';
}
);
vispy = super.vispy.overrideAttrs (
old: {
inherit (pkgs.python3.pkgs.vispy) patches;
nativeBuildInputs = old.nativeBuildInputs ++ [
self.cython
self.setuptools-scm-git-archive
];
}
);
uvloop = super.uvloop.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ lib.optionals stdenv.isDarwin [
pkgs.darwin.apple_sdk.frameworks.ApplicationServices
pkgs.darwin.apple_sdk.frameworks.CoreServices
];
}
);
# Stop infinite recursion by using bootstrapped pkg from nixpkgs
bootstrapped-pip = super.bootstrapped-pip.override {
wheel = (pkgs.python3.pkgs.override {
python = self.python;
}).wheel;
};
weasyprint = super.weasyprint.overridePythonAttrs (
old: {
inherit (pkgs.python3.pkgs.weasyprint) patches;
buildInputs = old.buildInputs ++ [ self.pytest-runner ];
}
);
web3 = super.web3.overridePythonAttrs {
preConfigure = ''
substituteInPlace setup.py --replace \'setuptools-markdown\' ""
'';
};
wheel =
let
isWheel = super.wheel.src.isWheel or false;
# If "wheel" is a pre-built binary wheel
wheelPackage = super.buildPythonPackage {
inherit (super.wheel) pname name version src;
inherit (pkgs.python3.pkgs.wheel) meta;
format = "wheel";
};
# If "wheel" is built from source
sourcePackage = (
pkgs.python3.pkgs.override {
python = self.python;
}
).wheel.overridePythonAttrs (
old: {
inherit (super.wheel) pname name version src;
}
);
in
if isWheel then wheelPackage else sourcePackage;
zipp = if super.zipp == null then null else
(
if lib.versionAtLeast super.zipp.version "2.0.0" then
(
super.zipp.overridePythonAttrs (
old: {
prePatch = ''
substituteInPlace setup.py --replace \
'setuptools.setup()' \
'setuptools.setup(version="${super.zipp.version}")'
'';
}
)
) else super.zipp
).overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [
self.toml
];
}
);
credis = super.credis.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.cython ];
}
);
hashids = super.hashids.overridePythonAttrs (
old: {
buildInputs = old.buildInputs ++ [ self.flit-core ];
}
);
supervisor = super.supervisor.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [
self.meld3
self.setuptools
];
}
);
cytoolz = super.cytoolz.overridePythonAttrs (
old: {
propagatedBuildInputs = old.propagatedBuildInputs ++ [ self.toolz ];
}
);
}