nixpkgs/pkgs/applications/science/biology/N3/default.nix
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00

36 lines
984 B
Nix

{ lib, stdenv, fetchFromGitHub, cmake, makeWrapper,
perlPackages,
libminc, EBTKS }:
stdenv.mkDerivation rec {
pname = "N3";
version = "unstable-2018-08-09";
src = fetchFromGitHub {
owner = "BIC-MNI";
repo = pname;
rev = "010fc2ac58ce1d67b8e6a863fac0809d3203cb9b";
sha256 = "06hci7gzhy8p34ggvx7gah2k9yxpwhgmq1cgw8pcd1r82g4rg6kd";
};
nativeBuildInputs = [ cmake makeWrapper ];
buildInputs = [ libminc EBTKS ];
propagatedBuildInputs = with perlPackages; [ perl MNI-Perllib GetoptTabular ];
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" "-DEBTKS_DIR=${EBTKS}/lib/" ];
postFixup = ''
for p in $out/bin/*; do
wrapProgram $p --prefix PERL5LIB : $PERL5LIB
done
'';
meta = with lib; {
homepage = "https://github.com/BIC-MNI/N3";
description = "MRI non-uniformity correction for MINC files";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
license = licenses.free;
};
}