nixpkgs/pkgs/applications/science/biology/igv/default.nix
Arcadio Rubio García 550e6146d4 igv: 2.3.98 -> 2.4.6
2018-01-21 21:07:44 +00:00

34 lines
882 B
Nix

{ stdenv, fetchurl, unzip, jre }:
stdenv.mkDerivation rec {
name = "igv-${version}";
version = "2.4.6";
src = fetchurl {
url = "http://data.broadinstitute.org/igv/projects/downloads/2.4/IGV_${version}.zip";
sha256 = "00p9xhfn6snzm31q9l3dxccsj7rhlci8n3pgpy3k67q91mi2hkna";
};
buildInputs = [ unzip jre ];
installPhase = ''
mkdir -pv $out/{share,bin}
cp -Rv * $out/share/
sed -i "s#prefix=.*#prefix=$out/share#g" $out/share/igv.sh
sed -i 's#java#${jre}/bin/java#g' $out/share/igv.sh
ln -s $out/share/igv.sh $out/bin/igv
chmod +x $out/bin/igv
'';
meta = with stdenv.lib; {
homepage = https://www.broadinstitute.org/igv/;
description = "A visualization tool for interactive exploration of genomic datasets";
license = licenses.lgpl21;
platforms = platforms.unix;
maintainers = [ maintainers.mimadrid ];
};
}