nixpkgs/pkgs/applications/science/biology/bowtie2/default.nix
volth 46420bbaa3 treewide: name -> pname (easy cases) (#66585)
treewide replacement of

stdenv.mkDerivation rec {
  name = "*-${version}";
  version = "*";

to pname
2019-08-15 13:41:18 +01:00

27 lines
720 B
Nix

{ stdenv, fetchFromGitHub, zlib, tbb, python, perl }:
stdenv.mkDerivation rec {
pname = "bowtie2";
version = "2.3.5.1";
src = fetchFromGitHub {
owner = "BenLangmead";
repo = pname;
rev = "v${version}";
sha256 = "1l1f0yhjqqvy4lpxfml1xwv7ayimwbpzazvp0281gb4jb5f5mr1a";
};
buildInputs = [ zlib tbb python perl ];
installFlags = [ "prefix=$(out)" ];
meta = with stdenv.lib; {
description = "An ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences";
license = licenses.gpl3;
homepage = http://bowtie-bio.sf.net/bowtie2;
maintainers = with maintainers; [ rybern ];
platforms = platforms.all;
broken = stdenv.isAarch64;
};
}