nixpkgs/pkgs/applications/science/biology/octopus/default.nix
volth 46420bbaa3 treewide: name -> pname (easy cases) (#66585)
treewide replacement of

stdenv.mkDerivation rec {
  name = "*-${version}";
  version = "*";

to pname
2019-08-15 13:41:18 +01:00

30 lines
759 B
Nix

{stdenv, fetchFromGitHub, cmake, boost, gmp, htslib, zlib, lzma, pkg-config}:
stdenv.mkDerivation rec {
pname = "octopus";
version = "0.6.3-beta";
src = fetchFromGitHub {
owner = "luntergroup";
repo = "octopus";
rev = "v${version}";
sha256 = "042fycg8ppld7iajpzq2d8h8wr0nw43zbl57y125sfihryvr373n";
};
nativeBuildInputs = [ cmake pkg-config ];
buildInputs = [ boost gmp htslib zlib lzma ];
postInstall = ''
mkdir $out/bin
mv $out/octopus $out/bin
'';
meta = with stdenv.lib; {
description = "Bayesian haplotype-based mutation calling";
license = licenses.mit;
homepage = "https://github.com/luntergroup/octopus";
maintainers = with maintainers; [ jbedo ];
platforms = platforms.x86_64;
};
}