whisper: init at 2.0.1

This commit is contained in:
Justin Bedo 2020-04-22 16:56:11 +10:00
parent f253fc13ec
commit 3139597277
No known key found for this signature in database
GPG key ID: 2C18202C56C182BD
2 changed files with 36 additions and 0 deletions

View file

@ -0,0 +1,34 @@
{ stdenv, fetchFromGitHub, fetchurl }:
stdenv.mkDerivation rec {
pname = "whisper";
version = "2.0.1";
src = fetchFromGitHub {
owner = "refresh-bio";
repo = pname;
rev = "v${version}";
sha256 = "0wpx1w1mar2d6zq2v14vy6nn896ds1n3zshxhhrrj5d528504iyw";
};
preConfigure = ''
cd src
# disable default static linking
sed -i 's/ -static / /' makefile
'';
installPhase = ''
runHook preInstall
install -Dt $out/bin whisper whisper-index
runHook postInstall
'';
meta = with stdenv.lib; {
description = "Short read sequence mapper";
license = licenses.gpl3;
homepage = "https://github.com/refresh-bio/whisper";
maintainers = with maintainers; [ jbedo ];
platforms = platforms.x86_64;
};
}

View file

@ -24906,6 +24906,8 @@ in
varscan = callPackage ../applications/science/biology/varscan { };
whisper = callPackage ../applications/science/biology/whisper { };
hmmer = callPackage ../applications/science/biology/hmmer { };
bwa = callPackage ../applications/science/biology/bwa { };