nixpkgs/pkgs/development/libraries/science/biology/elastix/default.nix
2021-01-21 19:11:02 -08:00

39 lines
1.1 KiB
Nix

{ lib, stdenv, fetchFromGitHub, fetchpatch, cmake, itk, python3, Cocoa }:
stdenv.mkDerivation rec {
pname = "elastix";
version = "5.0.1";
src = fetchFromGitHub {
owner = "SuperElastix";
repo = pname;
rev = version;
sha256 = "1mx8kkak2d3ibfrxrh8jkmh2zkdlgl9h578wiw3617zcwaa97bxw";
};
patches = [
(fetchpatch {
name = "install-executables.patch"; # https://github.com/SuperElastix/elastix/issues/305
url = "https://github.com/SuperElastix/elastix/commit/8e26cdc0d66f6030c7be085fdc424d84d4fc7546.patch";
sha256 = "12y9wbpi9jlarnw6fk4iby97jxvx5g4daq9zqblbcmn51r134bj5";
})
];
nativeBuildInputs = [ cmake python3 ];
buildInputs = [ itk ] ++ lib.optionals stdenv.isDarwin [ Cocoa ];
doCheck = !stdenv.isDarwin; # usual dynamic linker issues
preCheck = "
export LD_LIBRARY_PATH=$(pwd)/bin
";
meta = with lib; {
homepage = "http://elastix.isi.uu.nl/";
description = "Image registration toolkit based on ITK";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.x86_64; # libitkpng linker issues with ITK 5.1
license = licenses.asl20;
};
}